ggKbase home page

sw_12_scaffold_572

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_572_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..783
DNA (783bp) protein (261aa)
Homolog to KaiC-like transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU9_NATPD
KaiC-like transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CAI50557.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_12_scaffold_572_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

851..1651
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU8_NATPD
rad50 ATPase
CopG domain protein {ECO:0000313|EMBL:CAI50558.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_12_scaffold_572_3
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1644..2120
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDE3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ94067.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
sw_12_scaffold_572_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2164..2487
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
DNA-directed RNA polymerase subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4W9_NATM8
tfs2; transcription elongation factor TFS
sw_12_scaffold_572_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2539..3234
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MD80_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42350.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_12_scaffold_572_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3310..3807
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50566.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_12_scaffold_572_7
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4235..4930)
DNA (696bp) protein (232aa)
Family 2 glycosyl transferase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0ARI4_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:ELZ01336.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM
family 2 glycosyl transferase
sw_12_scaffold_572_8
unknown

Not on your lists

5034..5429
DNA (396bp) protein (132aa)

This feature has no annotations

sw_12_scaffold_572_9
unknown

Not on your lists

comp(5248..5832)
DNA (585bp) protein (195aa)

This feature has no annotations

sw_12_scaffold_572_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5923..7200
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L731_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA29356.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
sw_12_scaffold_572_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7387..7980
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43344.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_572_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7952..8179
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49647.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_572_13
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8411..8665
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XAS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY58742.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
sw_12_scaffold_572_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8758..8886)
DNA (129bp) protein (43aa)
Receiver/sensor box histidine kinase {ECO:0000313|EMBL:CAI49419.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI49419.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
sw_12_scaffold_572_15
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9120..10172
DNA (1053bp) protein (351aa)
Uncharacterized protein id=24656043 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein id=24656043 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
sw_12_scaffold_572_16

Not on your lists

comp(10322..11665)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MLH7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05726.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 16 items

View Taxonomy