ggKbase home page

sw_12_scaffold_577

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_577_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(82..774)
DNA (693bp) protein (231aa)
MgtC/SapB transporter n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3M2_THEOJ
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
MgtC/SapB transporter
sw_12_scaffold_577_2
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(943..1701)
DNA (759bp) protein (253aa)
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EMI42927.1}; EC=3.1.4.12 {ECO:0000313|EMBL:EMI42927.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planct
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T0Z7_9PLAN
hypothetical protein
sw_12_scaffold_577_3
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3070..3702)
DNA (633bp) protein (211aa)
membrane protein n=1 Tax=Gillisia marina RepID=UPI00029A7DF2
Membrane protein {ECO:0000313|EMBL:KJJ39105.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostoken
hypothetical protein
sw_12_scaffold_577_4
Drechslerella stenobrocha, Drechslerella, Orbiliales, Orbiliomycetes, Ascomycota, Fungi

Not on your lists

comp(3791..4489)
DNA (699bp) protein (233aa)
Plectin 1 isoform 8 n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TX91_9DELT
hypothetical protein
Kinesin-like protein {ECO:0000256|RuleBase:RU000394}; TaxID=1043628 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; mitosporic Orbiliaceae; Dre
sw_12_scaffold_577_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(4703..5899)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUX7_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
protein of unknown function UPF0118
sw_12_scaffold_577_6
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5955..6176)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZJX5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT72047.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
sw_12_scaffold_577_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(6620..6763)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ENL1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF86274.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
sw_12_scaffold_577_8
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7284..7502)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NLB5_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF21865.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="
CsbD-like protein
sw_12_scaffold_577_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8213..9214)
DNA (1002bp) protein (334aa)
zinc-binding alcohol dehydrogenase
zinc-binding alcohol dehydrogenase id=24659321 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc-binding alcohol dehydrogenase {ECO:0000313|EMBL:ABC44356.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_12_scaffold_577_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9426..10145
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8Y2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24487.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_577_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10254..11399
DNA (1146bp) protein (382aa)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:CBH24486.1}; EC=1.13.11.27 {ECO:0000313|EMBL:CBH24486.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8Y1_SALRM
hpd; 4-hydroxyphenylpyruvate dioxygenase
sw_12_scaffold_577_12
unknown

Not on your lists

comp(11271..11810)
DNA (540bp) protein (180aa)

This feature has no annotations

sw_12_scaffold_577_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11813..13531
DNA (1719bp) protein (573aa)
dnaA; chromosomal replication initiator protein DnaA
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=24659318 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
sw_12_scaffold_577_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13711..14859
DNA (1149bp) protein (383aa)
Cystathionine beta-lyase MetC n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2T9_SALRD
cystathionine beta-lyase MetC
Cystathionine beta-lyase MetC {ECO:0000313|EMBL:ABC44796.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_12_scaffold_577_15
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14929..16479
DNA (1551bp) protein (517aa)
Amidohydrolase n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIE2_MURRD
Metal-dependent amidohydrolase {ECO:0000313|EMBL:EMY82673.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexu
amidohydrolase
sw_12_scaffold_577_16
unknown

Not on your lists

comp(16514..16768)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying 16 items

View Taxonomy