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sw_12_scaffold_608

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_608_1
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..1668
DNA (1668bp) protein (556aa)
endo-1,4-beta-xylanase (EC:3.2.1.8)
Endo-1,4-beta-xylanase, family GH5 {ECO:0000313|EMBL:CAZ97654.1}; EC=3.2.1.8 {ECO:0000313|EMBL:CAZ97654.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacter
Endo-1,4-beta-xylanase, family GH5 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L8L2_ZOBGA
sw_12_scaffold_608_2
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

1971..5492
DNA (3522bp) protein (1174aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036781DA
ASPIC/UnbV domain-containing protein Tax=RBG_13_Caldithrix_44_9_curated
ASPIC/UnbV domain protein
sw_12_scaffold_608_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5533..6963)
DNA (1431bp) protein (477aa)
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|SAAS:SAAS00013438};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Glucuronate isomerase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJM9_RHOMR
sw_12_scaffold_608_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7025..8053)
DNA (1029bp) protein (343aa)
PfkB domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME10_RHOM4
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ACY49154.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
sw_12_scaffold_608_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8069..8752)
DNA (684bp) protein (228aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK5_RHOMR
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:AEN74173.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
sw_12_scaffold_608_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8860..9957)
DNA (1098bp) protein (366aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase {ECO:0000313|EMBL:AEN74174.1}; EC=4.2.1.6 {ECO:0000313|EMBL:AEN74174.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Galactonate dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK6_RHOMR
sw_12_scaffold_608_7
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10273..11061)
DNA (789bp) protein (263aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF68_9BACT
short-chain dehydrogenase/reductase SDR
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDY83542.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrob
sw_12_scaffold_608_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11275..12570)
DNA (1296bp) protein (432aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK7_RHOMR
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AEN74175.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
sw_12_scaffold_608_9
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12613..13155)
DNA (543bp) protein (181aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME14_RHOM4
tripartite AtP-independent periplasmic transporter subunit DctQ
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:AKA34575.1}; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Murica
sw_12_scaffold_608_10
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13405..14355)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000346FFEB
TRAP dicarboxylate transporter subunit DctP
Tax=BJP_IG2102_Ignavibacteriales_35_8
sw_12_scaffold_608_11
unknown

Not on your lists

comp(14435..15031)
DNA (597bp) protein (199aa)

This feature has no annotations

sw_12_scaffold_608_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15560..17188
DNA (1629bp) protein (543aa)
sodium/glucose cotransporter
sodium/glucose cotransporter; K03307 solute:Na+ symporter, SSS family id=24657122 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sodium/glucose cotransporter {ECO:0000313|EMBL:ABC43875.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_608_13
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(17327..18169)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C637A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCW35131.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas cal
sw_12_scaffold_608_14
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(18169..19986)
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003735A95
ASPIC and UnbV./Family description
ASPIC and UnbV./Family description {ECO:0000313|EMBL:CCW35132.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chtho
sw_12_scaffold_608_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20350..23769)
DNA (3420bp) protein (1140aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003707A83
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEN73410.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
Displaying 15 items

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