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sw_12_scaffold_61

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_61_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..139
DNA (138bp) protein (46aa)
hypothetical protein
hypothetical protein; K07735 putative transcriptional regulator id=24657347 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UPF0301 protein SRM_00577 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_12_scaffold_61_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

433..969
DNA (537bp) protein (179aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH-quinone oxidoreductase subunit I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H644_SALRM
nuoI; NADH dehydrogenase I, I subunit
sw_12_scaffold_61_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1109..1771
DNA (663bp) protein (221aa)
hypothetical protein id=24657349 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23500.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_61_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1855..2898
DNA (1044bp) protein (348aa)
holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] id=24657350 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase III delta subunit {ECO:0000313|EMBL:CBH23501.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH23501.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
holA; DNA polymerase III subunit delta
sw_12_scaffold_61_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3155..3793
DNA (639bp) protein (213aa)
hypothetical protein
hypothetical protein id=24657351 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45371.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_61_trna_1
unknown

Not on your lists

3879..3952
DNA (74bp)
transferRNA
sw_12_scaffold_61_6
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(4146..4289)
DNA (144bp) protein (48aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
sw_12_scaffold_61_7
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4387..5118
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6A5_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61806.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Iso
sw_12_scaffold_61_8
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

5155..6198
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000363ABE8
aryldialkylphosphatase; K07048 phosphotriesterase-related protein Tax=RBG_16_Aminicenantes_63_16_curated
aryldialkylphosphatase
sw_12_scaffold_61_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6299..7729
DNA (1431bp) protein (477aa)
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|SAAS:SAAS00013438};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Glucuronate isomerase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJM9_RHOMR
sw_12_scaffold_61_10
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7793..9157)
DNA (1365bp) protein (455aa)
Oxidoreductase domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L8A7_HALH1
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEE54615.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscome
sw_12_scaffold_61_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9203..10048)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKX5_TERRK
protein of unknown function DUF1080
Uncharacterized protein {ECO:0000313|EMBL:AHG93132.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_12_scaffold_61_12
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10436..11845)
DNA (1410bp) protein (470aa)
Transporter, solute:sodium symporter (SSS) family protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VCQ1_9BACT
Transporter, solute:sodium symporter (SSS) family protein {ECO:0000313|EMBL:EPR67342.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" s
Na+/solute symporter
sw_12_scaffold_61_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11854..12102)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J7Y2_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL28651.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (str
sw_12_scaffold_61_14
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12121..13281)
DNA (1161bp) protein (387aa)
Oxidoreductase domain protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J7Y4_CYCMS
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEL28653.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinu
sw_12_scaffold_61_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13344..13787)
DNA (444bp) protein (148aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QN4_SOLUE
cupin
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ABJ88036.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="S
sw_12_scaffold_61_16
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(13871..14761)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I307_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99644.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
sw_12_scaffold_61_17
unknown

Not on your lists

14769..14906
DNA (138bp) protein (46aa)

This feature has no annotations

sw_12_scaffold_61_18
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15028..15825)
DNA (798bp) protein (266aa)
Transcriptional regulator n=1 Tax=Brevibacillus sp. CF112 RepID=J2IG83_9BACL
Transcriptional regulator {ECO:0000313|EMBL:EJL47683.1}; TaxID=1144311 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;"
IclR family transcriptional regulator
sw_12_scaffold_61_19
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16269..17459)
DNA (1191bp) protein (397aa)
Hypothetical secreted protein n=1 Tax=uncultured planctomycete 3FN RepID=A9LGV6_9BACT
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
sw_12_scaffold_61_20

Not on your lists

comp(17502..17990)
DNA (489bp) protein (163aa)
Cupin domain n=1 Tax=uncultured organism RepID=T1W9B8_9ZZZZ
Cupin domain {ECO:0000313|EMBL:AGU11276.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sw_12_scaffold_61_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18100..19638)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035F6DC0
Glucose/sorbosone dehydrogenase-like protein {ECO:0000313|EMBL:CCH54620.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
hypothetical protein
sw_12_scaffold_61_22
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19635..20852)
DNA (1218bp) protein (406aa)
Blue (Type 1) copper domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ77_PEDHD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACU02559.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedob
sw_12_scaffold_61_23
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20879..23725)
DNA (2847bp) protein (949aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MPN8_SACVD
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:ACU96283.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora vir
sw_12_scaffold_61_24
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(23749..24984)
DNA (1236bp) protein (412aa)
Chloromuconate cycloisomerase n=1 Tax=uncultured planctomycete 3FN RepID=A9LGV7_9BACT
mandelate racemase/muconate lactonizing protein Tax=CG_Arma_01
mandelate racemase/muconate lactonizing protein
sw_12_scaffold_61_25

Not on your lists

comp(25379..26788)
DNA (1410bp) protein (470aa)
sGSH; N-sulfoglucosamine sulfohydrolase SGSH (EC:3.10.1.1)
N-sulfoglucosamine sulfohydrolase SGSH n=1 Tax=Arthrobacter sp. Rue61a RepID=J7LYB1_9MICC
Marine sediment metagenome DNA, contig: S03H2_C04056 {ECO:0000313|EMBL:GAH18505.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sw_12_scaffold_61_26
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26832..28427)
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E380C
sulfatase
Sulfatase {ECO:0000313|EMBL:ACU04451.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain AT
sw_12_scaffold_61_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28447..29013)
DNA (567bp) protein (189aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI9_RHOM4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY48647.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
sw_12_scaffold_61_28
unknown

Not on your lists

comp(29010..29174)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 29 items

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