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sw_12_scaffold_6210

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_6210_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3..1409
DNA (1407bp) protein (469aa)
Type IV pilin n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S334_SALRD
type IV pilin
Type IV pilin {ECO:0000313|EMBL:ABC45439.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_12_scaffold_6210_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1491..2096
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CVY3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22812.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_6210_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2147..2908
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CVY2_SALRM
Conserved hypothetical protein, secreted
Uncharacterized protein {ECO:0000313|EMBL:CBH22811.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_6210_4
unknown

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3044..3943
DNA (900bp) protein (300aa)

This feature has no annotations

sw_12_scaffold_6210_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3909..4358
DNA (450bp) protein (150aa)
PKD domain-containing protein id=24651845 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Uncharacterized protein {ECO:0000313|EMBL:ERH11558.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
sw_12_scaffold_6210_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4784..5749)
DNA (966bp) protein (322aa)
Twitching motility protein PilT n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8N4_SALRM
pilT; twitching motility protein PilT rbh
Twitching motility protein PilT {ECO:0000313|EMBL:CBH24389.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_12_scaffold_6210_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5918..6055
DNA (138bp) protein (46aa)
pilT; twitching motility protein PilT
pilT; twitching motility protein PilT; K02669 twitching motility protein PilT id=24659223 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Twitching motility protein PilT {ECO:0000313|EMBL:CBH24387.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_12_scaffold_6210_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6154..7779
DNA (1626bp) protein (542aa)
hypothetical protein id=24659224 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24388.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_6210_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7718..8296
DNA (579bp) protein (193aa)
fimbrial assembly protein (PilN)
Fimbrial assembly protein (PilN) {ECO:0000313|EMBL:ABC45296.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
hypothetical protein id=24659224 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_12_scaffold_6210_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8360..9361
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8N5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24390.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_6210_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9333..9794
DNA (462bp) protein (154aa)
Probable general secretion pathway protein D [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8N6_SALRM
gspD; general secretion pathway protein D
Probable general secretion pathway protein D [Precursor] {ECO:0000313|EMBL:CBH24391.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
sw_12_scaffold_6210_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9791..10825
DNA (1035bp) protein (345aa)
General (Type II) secretion pathway (GSP) D protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S327_SALRD
gspD; general secretion pathway protein D
Probable general secretion pathway protein D [Precursor] {ECO:0000313|EMBL:CBH24391.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
sw_12_scaffold_6210_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10919..11239
DNA (321bp) protein (107aa)
hypothetical protein
hypothetical protein id=24659227 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24392.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_6210_14
unknown

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11191..12042
DNA (852bp) protein (284aa)

This feature has no annotations

Displaying 14 items

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