ggKbase home page
Advanced Search
Search Help

sw_12_scaffold_74_10

Organism: SW_12_UNK

megabin RP 51 / 55 MC: 40 BSCG 46 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: 10283..14623

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 999.99
  • Bit_score: 2691
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=24659719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 999.99
  • Bit_score: 2691
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 999.99
  • Bit_score: 2691
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4341
ATGCCCTACGGTAATTCCAAGGAGATCAAAACGGATTTCGACAACATCACGATCAGCCTGGCCTCTCCGGAAGACATCCTGGATCGGTCATACGGCGAGGTGATGAAGCCCGAGACCATCAATTACCGGTCCTTCAAGCCGGAGATGGGCGGGCTTTTCTGCGAGAAGATCTTCGGCCCGGTTAAAGACTACGAGTGCCACTGCGGAAAGTACAAGCGCATCCGGTACAAGGGCATTATCTGTGACCGGTGTGGCGTTGAGGTCACCCGCAAGGCCGTCCGCCGCGAGCGCATGGGACACATTTCCCTGAGCGTACCAGTGGTTCACATCTGGTACTTCAAGACGCTGCCCAACAAGATTGGGCACCTCCTGGGCCTGAAGTCGAAGGACCTGGAAAAAGTCATTTACTACGAAAACTACATCGTCATCCAGCCGGGGACGGCCGAGCGGCTTGGGATTGAGGAGAACCAGCTCCTGACCGAAGAGGAATACTACGAGATTCTCTACCAGATTCGGGACGATAACAACCGCCTCCAGGACGACGACCCGGAGAAGTTCATCGCCAAGATTGGTGGAGAGGCGGTCGAGACGATGCTGGAGCGCCTCGACCTCGACAAGCTTGCGCAGGACCTCCGGTTCCAGGTCAAGACGGAGACGAGCCAGCAGCGGAAGTCCAAGGCGCTGAAGCGACTCAACGTCGTGGAGGCCTTCCGTGAGGCAAACAAGGACGGGGAGAACAAGCCTACGTGGATGGTGATGCGGGTCATTCCGGTCATTCCGCCGGAGCTCCGTCCCCTCGTGCCGCTGGACGGTGGACGCTTTGCGACCAGCGACTTGAACGATCTGTACCGCCGGGTGATTATCCGCAACAATCGCCTCAAGCGCCTCATCGACATCAAGGCGCCGGAGGTTATCCTGCGGAACGAGAAGCGCATGCTCCAGGAGGCGGTCGACTCGCTGTTCGACAATAGCCGCAAGTCCAACTCGGTCCGCGGTTCGTCGAACCGGCCCCTCAAGAGCCTCTCGGACATGCTGAAGGGCAAGCAGGGGCGCTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGCCGGTCGGTCATCGTCTCCGGCCCGCACCTGGAGCTGCACCAGTGCGGCCTGCCGAAGGAGATGGCCGTCGAGCTCTTCAAACCCTTCATCATCCGCCGCCTCATCGAGCGCGGCATCGTGAAGACGGTGAAGAGCGCCAAGAAGTACGTCGACAAGAAATCCGAGGATGTCTGGGACATCCTGGAGAAGGTGATTCAGGGGAGACCCGTATTACTCAACCGTGCCCCCACGCTTCACCGGCTCGGCATCCAGGCCTTTCAGCCCGTCCTCACCGAAAACAAGGCCATCGAGATTCACCCGCTCGTCTGCCCGGCGTACAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTCCCGCTCTCCCACGAGGCGTGCCTCGAGAGCATGGTGCTGATGCTGTCGAGCCACAACGTGCGGAGCCCGGCCGACGGCGGGCCGCTCGCCGTACCGAGCCAGGACATGATTCTCGGTCTCTACTACATCACGAAGGCCAAGTCCAACCAGAAGGGCGAGGGCATGCGCTTCGCCAACATCGAGGAAGTGCGGCAGGCCTTCGACCAGGACCGGGTGGCCCTCCACGCCAAGATTAAGCTCCGCGACCCGGACGGTTCGGGCGAGATTGTGGATACGACCGTCGGGCGCGTGGTCTTCAACGAGGCGCTGCCGGACGGGCTCGATTTCGTGAACGAGGTGCTGACCACGAAGAATGTGCGGCCGGTCATTGCCAATGTCCTGAAGCAGACCGGCTTCCAGGAGACCGCCGAGTTCCTGGACGACATCAAGGACATGGGCTTCCGTCGCTCCACCACCTCGGGCATGACCTTCGCGCTCTCGGACATCATCATTCCGGAGGAGAAGGAGACGCTCATCGAGGAGGCCAACGAGAAGGTCGAGTCGACCGACCAGAACTACGAGATGGGCTACATCACCGACAACGAGCGGTACAACCAGGTGATCGACGTCTGGACGAAGACCAACAACCGCGTCTCGGAGGTGCTCTTCGAGGCCCTGAAGGAGCACAAGGAGGGCTTCAACCCCATCTTTACGATGGCCGACTCCGGGGCCCGAGGCTCGCAGGAGCAGATCCGTCAGCTCGGCGGCATGCGCGGGCTCATGGCCAAGCCGCAGAAGAACATCGGCGAGGGCGGCGGCGAGATCCTCGAGAACCCGATCCTCTCCAACTTCAAGGAAGGCCTGTCGGTGCAGGAGTACTTCATTAGCACCCACGGCTCGCGGAAGGGCCTGGCCGACACGGCGCTGAAGACGGCCGACGCGGGCTACCTCACGCGTCGTCTCGTGGACGTGTCGCAGAGCGTGACGGTGACGGAGCACGACTGTGGCACGCTGCGCGGCATCGACGTGGGGGCGCTCAAGGACAACGAGGAGATCGTGGCGCCGCTCACGGACCGCATTACGGGCCGCGTGTCGGTGCGCGACGTGTACGATCCCCACACCGATGAGCTGATCGTGGAGGCGAACGAGCTCATCACCGAGGAGATTGCCGATCACATTGCCCAGACCTCCATCGAGGAGGTGGAGATCCGGTCGGTGCTCACCTGCGAGGCCGAGCGGGGAGTCTGCACGCTCTGCTACGGGCTCAACCTCGCCACTGGCCGCATGGTGGAGGTGGGCGAGTCGGTCGGTGTGGTGGCAGCCCAATCGATCGGGGAGCCGGGGACGCAGCTCACGCTCCGGACTTTCCACACCGGCGGAACCGCCACGCGTGAGGTCGGCGAGTCGACCATTCAGGCGAAATTTGCCGGCACCCTCGAGTTCGAGAACCTCCGAACCGTGACGTACGAGGATACCGACGGCCCGAAGGAGGTTGTGCTCTCGCGGCAGGGGGAAATCCGAATTATGGATTCCGACGGCGATCGGCGCGAGCTCACCAGTTACGTCGTTCCCTACGGGGCCGAGCTACTGGTGGACGAGGACCAGGAGGTCGACGAGGGCGACGTGATGGCCAGCTGGGATCCGTACAACAGCCTCATCCTCACCGAAGCCAACGGCACGGTGCGCTTCGAGGACGTAATCGAGGACACCACCTACCGCGAGGAGACCGACGAGCAGACCGGCCACATGGAGAAGGTGATCGTCGAGAGCCGCGAGCGCACCCTGACGCCGACCCTCGTCATCGAAACCGAAGACGGGGACGTACGGGAGTACAACATGCCCGTCGATGCCCGCATTCAGGTCGACGAGGATGAGACGGTGCAGGCCGGGCAGACCCTCGCAAAGATTCCGCGTCAGGCGGCGCAGACCAGCGACATTACCGGCGGTCTTCCGCGCGTTGAGGAGCTCTTCGAGGCACGCACCCCGGACGAGCCGGCCGCCGTCAGCGAGATCGACGGCATCGTCAGCTTCGGCGACCAGAAGCGGGGCTCGCAGGAGATTATTGTCACCAGCCGCGACGGGGACATGGAGAAGAGCTACATGGTGTCCCTCTCGAAGCACATGCTGGTGCACGAGGGCGATTACGTGGAGGCTGGCGACCGCCTCTCGGACGGCCAGATTGCCCCGCACGACATCCTGTCGATCAAGGGCCCGCGGGCGGTGCAAGAACACCTACTCAACGAGGTGCAGGAGGTGTATCGGCTGCAGGGCGTCGACATCGACGACAAGCACTTCGAGGTCGTCATCCGGCAGATGATGAAGCGGGTCGAGATCACGGAGCCCGGCGACACCCACTTCCTGGAAGAGCAGAAGGTGGATCGCCAGAAGATGTCGAACGTCAACGACGACCTCTACGACCAATTCGTCGTGACCGACCCGAGCGAGGCGGACGTGGAGATTGGCGAGACCATTGGCCGTCGGCGCCTGCGCGAGCTCAACTCCGAGCTCAAGCGGGCAGACGAGCCGGAAGTTGAGGTCCGCGAGGCGCGACCCGCCGTGGGCGAGCCGGTGCTTCTCGGCATCACGAAGGCGTCGTTGGCCACGGACTCGATGATTTCGGCCGCCTCGTTCCAGGAGACCACGAAGGTGCTCACGAACTCGTCCATCCGCGCCCGAACCGACCCCCTGGAGGGCCTCAAGGAGAACGTCGTCGTGGGGCACTCCATCCCGGCCGGCACGGGGCAGCGCGAGTACCGCGACCTCGTGGTGGGCTCGAAGTCCGAGCTCGAAGAGCTGCAGGCCGCAATCGGTGGCGACGGCGAGGCCCCCGCAGGCGATGGCGCCGCCGGCGACGGGGCGCCGAGCGAGGAGGATGTCGAGCAGATCGAGGCCTCCGAGTCCGAGGGCTAA
PROTEIN sequence
Length: 1447
MPYGNSKEIKTDFDNITISLASPEDILDRSYGEVMKPETINYRSFKPEMGGLFCEKIFGPVKDYECHCGKYKRIRYKGIICDRCGVEVTRKAVRRERMGHISLSVPVVHIWYFKTLPNKIGHLLGLKSKDLEKVIYYENYIVIQPGTAERLGIEENQLLTEEEYYEILYQIRDDNNRLQDDDPEKFIAKIGGEAVETMLERLDLDKLAQDLRFQVKTETSQQRKSKALKRLNVVEAFREANKDGENKPTWMVMRVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIDIKAPEVILRNEKRMLQEAVDSLFDNSRKSNSVRGSSNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVSGPHLELHQCGLPKEMAVELFKPFIIRRLIERGIVKTVKSAKKYVDKKSEDVWDILEKVIQGRPVLLNRAPTLHRLGIQAFQPVLTENKAIEIHPLVCPAYNADFDGDQMAVHVPLSHEACLESMVLMLSSHNVRSPADGGPLAVPSQDMILGLYYITKAKSNQKGEGMRFANIEEVRQAFDQDRVALHAKIKLRDPDGSGEIVDTTVGRVVFNEALPDGLDFVNEVLTTKNVRPVIANVLKQTGFQETAEFLDDIKDMGFRRSTTSGMTFALSDIIIPEEKETLIEEANEKVESTDQNYEMGYITDNERYNQVIDVWTKTNNRVSEVLFEALKEHKEGFNPIFTMADSGARGSQEQIRQLGGMRGLMAKPQKNIGEGGGEILENPILSNFKEGLSVQEYFISTHGSRKGLADTALKTADAGYLTRRLVDVSQSVTVTEHDCGTLRGIDVGALKDNEEIVAPLTDRITGRVSVRDVYDPHTDELIVEANELITEEIADHIAQTSIEEVEIRSVLTCEAERGVCTLCYGLNLATGRMVEVGESVGVVAAQSIGEPGTQLTLRTFHTGGTATREVGESTIQAKFAGTLEFENLRTVTYEDTDGPKEVVLSRQGEIRIMDSDGDRRELTSYVVPYGAELLVDEDQEVDEGDVMASWDPYNSLILTEANGTVRFEDVIEDTTYREETDEQTGHMEKVIVESRERTLTPTLVIETEDGDVREYNMPVDARIQVDEDETVQAGQTLAKIPRQAAQTSDITGGLPRVEELFEARTPDEPAAVSEIDGIVSFGDQKRGSQEIIVTSRDGDMEKSYMVSLSKHMLVHEGDYVEAGDRLSDGQIAPHDILSIKGPRAVQEHLLNEVQEVYRLQGVDIDDKHFEVVIRQMMKRVEITEPGDTHFLEEQKVDRQKMSNVNDDLYDQFVVTDPSEADVEIGETIGRRRLRELNSELKRADEPEVEVREARPAVGEPVLLGITKASLATDSMISAASFQETTKVLTNSSIRARTDPLEGLKENVVVGHSIPAGTGQREYRDLVVGSKSELEELQAAIGGDGEAPAGDGAAGDGAPSEEDVEQIEASESEG*