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sw_12_scaffold_17626_2

Organism: SW_12_Actinobacteria_70_9

partial RP 10 / 55 BSCG 12 / 51 MC: 1 ASCG 2 / 38
Location: comp(399..1109)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00034BB341 similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 201.0
  • Bit_score: 242
  • Evalue 5.90e-61
putative small conductance mechanosensitive channel Tax=RBG_16_Actinobacteria_68_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 232.0
  • Bit_score: 242
  • Evalue 8.30e-61
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 210.0
  • Bit_score: 234
  • Evalue 3.50e-59

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Taxonomy

RBG_16_Actinobacteria_68_21_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 711
TTGCTGCTTTTGGGCGAGCTCGGCGTGCACCTGGGACCGCTCATCGCCGCGATCGGAATCGTCGGGCTGGCGTTGGGCTTTGGCGCCCAGCGCCTGGTCCAGGACCTGCTGTCGGGGCTGTTCATCCTGTTGGAGGATCAGTTCGGCGTCGGTGACGTGGTCGACACCGGAGAGGTCATCGGCACCGTGGAGGGGGTGACCCTGCGGCTGACCCGGGTGCGCGACGTGGGCGGCACGCTGTGGCATGTGCCCAACGGCGACATCCGCCGGGCCGGCAACTTCAGCCATGGCTGGGCCAGAGCCGTTGTGGATGTCGACATTGCCTACGACACCGACGTCGGGCGCGCCACGGCGGTCATCGAGGCGGCCGCCAACCAGCTCCTTGACGACGACGCGCGAGGCCAGGGCGTGACCGGCGCCGCCGAGGTCTGGGGTGTGCAGGACCTCGGCGCCAACGGGGTGAGGCTGCGGGTGGCCATGCCCACCGCGCCGGCCCACCAGTGGGCGGTCGAGCGCGAGCTGCGCGCCCGCATCAAGGCCGCCATGGACGCCGAGGGCCTCGAAATCCCCTTCCCGCAGCGCACCGTCTGGGTGCGCCCACAGGACCCCGAGGACGGCCAGGACGGCACGCGGTGGCGCCCCACCTCGCTGCACCCCCAGCCCGCGGGGCCAGCGGGCCGAGCTGACCGCCCCGCCGGTCGTGTAACGTAG
PROTEIN sequence
Length: 237
LLLLGELGVHLGPLIAAIGIVGLALGFGAQRLVQDLLSGLFILLEDQFGVGDVVDTGEVIGTVEGVTLRLTRVRDVGGTLWHVPNGDIRRAGNFSHGWARAVVDVDIAYDTDVGRATAVIEAAANQLLDDDARGQGVTGAAEVWGVQDLGANGVRLRVAMPTAPAHQWAVERELRARIKAAMDAEGLEIPFPQRTVWVRPQDPEDGQDGTRWRPTSLHPQPAGPAGRADRPAGRVT*