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sw_12_scaffold_5342

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Displaying 6 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_5342_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1079)
DNA (1077bp) protein (359aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISH2_NATPD
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
sw_12_scaffold_5342_2

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1408..1686
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V5A736_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11395.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_12_scaffold_5342_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1720..2142)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2Z8Z9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57110.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_5342_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2390..3247)
DNA (858bp) protein (286aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CAI48838.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CAI48838.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteri
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP8_NATPD
sw_12_scaffold_5342_5
unknown

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comp(3344..3511)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_12_scaffold_5342_6
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3665..3877)
DNA (213bp) protein (71aa)
DNA-binding protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NUQ6_9EURY
ArsR family transcriptional regulator
DNA-binding protein {ECO:0000313|EMBL:EMA61692.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
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