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sw_12_scaffold_131

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_131_1
unknown

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3..578
DNA (576bp) protein (192aa)

This feature has no annotations

sw_12_scaffold_131_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1522..2520)
DNA (999bp) protein (333aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=662477 speci
Naphthoate synthase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J2F2_HALVA
naphthoate synthase
sw_12_scaffold_131_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2576..4351)
DNA (1776bp) protein (592aa)
menD; 2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC:4.1.3.- 4.1.1.71)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000255|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000255|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000255|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=MEND_NATPD
sw_12_scaffold_131_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4348..5682)
DNA (1335bp) protein (445aa)
menF; isochorismate synthase (EC:5.4.4.2)
Isochorismate synthase n=1 Tax=Halogranum salarium B-1 RepID=J3JI12_9EURY
Isochorismate synthase {ECO:0000313|EMBL:EJN61451.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_12_scaffold_131_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5773..6363)
DNA (591bp) protein (197aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CX32_9EURY
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:ELZ26439.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
reductase ( nitrate reductase/sulfite dehydrogenase)
sw_12_scaffold_131_6
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6534..6746
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Halovivax RepID=L0I8N5_HALRX
hypothetical protein
CopG family transcriptional regulator {ECO:0000313|EMBL:ELZ13559.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus
sw_12_scaffold_131_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6804..7082
DNA (279bp) protein (93aa)
UPF0058 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQZ2_NATPD
hypothetical protein
UPF0058 family protein {ECO:0000313|EMBL:CAI49452.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_12_scaffold_131_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7234..7743
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA19767.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_12_scaffold_131_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7792..8454
DNA (663bp) protein (221aa)
O-methyltransferase family 3 n=1 Tax=Halomicrobium katesii RepID=UPI00037DB59D
Caffeoyl-CoA O-methyltransferase/O-methyltransferase family 3 {ECO:0000313|EMBL:EMA18752.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
O-methyltransferase family 3
sw_12_scaffold_131_10
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8522..10177
DNA (1656bp) protein (552aa)
alkK_5; long-chain-fatty-acid--CoA ligase (EC:6.2.1.- 6.2.1.3)
O-succinylbenzoate--CoA ligase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WEX6_9EURY
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:ELY47912.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense
sw_12_scaffold_131_11
unknown

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10234..10617
DNA (384bp) protein (128aa)

This feature has no annotations

sw_12_scaffold_131_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10802..11956
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWR0_HALMD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACV48270.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
sw_12_scaffold_131_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12214..12933)
DNA (720bp) protein (240aa)
DICT domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4E8_NATM8
DICT domain protein
DICT domain protein {ECO:0000313|EMBL:CCQ37401.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_12_scaffold_131_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13164..15053
DNA (1890bp) protein (630aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWR3_HALMD
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ACV48273.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium
sw_12_scaffold_131_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15055..15990
DNA (936bp) protein (312aa)
porB; pyruvate--ferredoxin oxidoreductase, beta subunit (EC:1.2.7.1)
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=1 Tax=Halobacterium sp. DL1 RepID=G4IBK7_9EURY
2-ketoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:AHG04169.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" so
sw_12_scaffold_131_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16116..16544
DNA (429bp) protein (143aa)
Lrp/AsnC family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS92_NATM8
Lrp/AsnC family transcription regulator
Lrp/AsnC family transcription regulator {ECO:0000313|EMBL:CCQ37210.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_12_scaffold_131_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16767..17255
DNA (489bp) protein (163aa)
cyclase/dehydrase id=24615349 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Cyclase/dehydrase {ECO:0000313|EMBL:ESP87240.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum ty
hypothetical protein
sw_12_scaffold_131_18
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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17298..18194
DNA (897bp) protein (299aa)
Putative drug/metabolite exporter family protein permease n=1 Tax=Haloferax sp. BAB2207 RepID=L5NY62_9EURY
Putative drug/metabolite exporter family protein permease {ECO:0000313|EMBL:ELK55345.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source
transporter of the drug/metabolite transporter (DMT) superfamily
sw_12_scaffold_131_19
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(18209..18895)
DNA (687bp) protein (229aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H7J8_9EURY
dethiobiotin synthase
sw_12_scaffold_131_20
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(18892..20079)
DNA (1188bp) protein (396aa)
bioF; 8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:AFK20912.1}; EC=2.3.1.47 {ECO:0000313|EMBL:AFK20912.1};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
8-amino-7-oxononanoate synthase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9K2_HALMT
sw_12_scaffold_131_21
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(20081..21148)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9K3_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK20913.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_12_scaffold_131_22
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(21150..22256)
DNA (1107bp) protein (369aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000313|EMBL:ELZ95838.1}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694};; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IIZ3_9EURY
sw_12_scaffold_131_23
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(22606..23022)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HB67 RepID=U1P5B7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH11910.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_12_scaffold_131_24
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(23051..23659)
DNA (609bp) protein (203aa)
Transcription initiation factor IIB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1I8_NATM8
tfbA1; transcription initiation factor TFB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Displaying 24 items

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