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sw_12_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_144_1
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..550)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M3G8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39149.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_12_scaffold_144_2
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(641..1492)
DNA (852bp) protein (284aa)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {EC
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M151_9EURY
ubiA; prenyltransferase
sw_12_scaffold_144_trna_1
unknown

Not on your lists

1800..1874
DNA (75bp)
transferRNA
sw_12_scaffold_144_3

Not on your lists

2129..2767
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4YD07_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09012.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_12_scaffold_144_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3108..3632
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21125.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_144_5

Not on your lists

3816..4451
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1F0_9ARCH
sw_12_scaffold_144_6
unknown

Not on your lists

4527..5315
DNA (789bp) protein (263aa)

This feature has no annotations

sw_12_scaffold_144_7
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5359..5718
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9H5_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH38061.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_12_scaffold_144_8
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5719..6840)
DNA (1122bp) protein (374aa)
NADH dehydrogenase n=3 Tax=Haloferax RepID=M0FLX3_9EURY
NADH dehydrogenase {ECO:0000313|EMBL:ELZ64267.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
NADH dehydrogenase
sw_12_scaffold_144_9

Not on your lists

7340..7855
DNA (516bp) protein (172aa)
Cupin domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y6F3_9ARCH
Cupin domain protein {ECO:0000313|EMBL:ESS10438.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_12_scaffold_144_10

Not on your lists

comp(7918..8541)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MNS1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07049.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_144_11
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8538..9023)
DNA (486bp) protein (162aa)
Monooxygenase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V793_HALMA
hyrA1; monooxygenase
Monooxygenase {ECO:0000313|EMBL:AAV44692.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC 43
sw_12_scaffold_144_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9076..10047)
DNA (972bp) protein (324aa)
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33)
Phosphomevalonate decarboxylase {ECO:0000313|EMBL:CAI48881.1}; EC=4.1.1.- {ECO:0000313|EMBL:CAI48881.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Diphosphomevalonate decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISK5_NATPD
sw_12_scaffold_144_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10338..10760
DNA (423bp) protein (141aa)
Cox cluster protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIK3_9EURY
cox cluster protein
Cox cluster protein {ECO:0000313|EMBL:ERJ04598.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
sw_12_scaffold_144_14

Not on your lists

10814..11173
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWX0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07480.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
cox cluster protein
sw_12_scaffold_144_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11246..13075
DNA (1830bp) protein (610aa)
Cytochrome c oxidase, subunit I n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWS3_HALMD
cytochrome C oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ACV48283.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
sw_12_scaffold_144_16
unknown

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comp(13086..13181)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_12_scaffold_144_17
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13241..13513
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KBG6_HALAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15691.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_12_scaffold_144_18

Not on your lists

13551..14387
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCD1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05589.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_12_scaffold_144_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14375..15058)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A4P9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60448.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
thioredoxin
sw_12_scaffold_144_20
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15060..15803)
DNA (744bp) protein (248aa)
Putative branched-chain amino acids ABC transporter ATP-binding protein n=3 Tax=Haloferax RepID=L5NW56_9EURY
Putative branched-chain amino acids ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ92234.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
livF1; putative branched-chain amino acids ABC transporter ATP-binding protein
sw_12_scaffold_144_21

Not on your lists

comp(15800..16570)
DNA (771bp) protein (257aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3J8_9ARCH
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ESS05592.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livG2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_12_scaffold_144_22

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comp(16563..17804)
DNA (1242bp) protein (414aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=uncultured archaeon A07HR60 RepID=V4YD46_9ARCH
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ESS12973.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
livM1; branched-chain amino acid ABC transporter permease
sw_12_scaffold_144_23

Not on your lists

comp(17801..18751)
DNA (951bp) protein (317aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCD5_9ARCH
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ESS05594.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livH1; putative branched-chain amino acids ABC transporter permease
sw_12_scaffold_144_24
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18876..20204)
DNA (1329bp) protein (443aa)
Branched-chain amino acid ABC transporter amino acid-binding protein n=2 Tax=Haloarcula RepID=M0JUU8_9EURY
Branched-chain amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:EMA12153.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
livK-2; branched-chain amino acid ABC transporter amino acid-binding protein
sw_12_scaffold_144_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20310..22295)
DNA (1986bp) protein (662aa)
Acetyl-CoA synthetase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP0_9EURY
Acetyl-CoA synthetase {ECO:0000313|EMBL:EMA44193.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
AMP-dependent synthetase and ligase
sw_12_scaffold_144_26
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22372..24423)
DNA (2052bp) protein (684aa)
PAS sensor protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BUN6_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELZ14670.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans DSM 11
PAS domain S-box
sw_12_scaffold_144_27
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24537..25790)
DNA (1254bp) protein (418aa)
Acetate/CoA ligase n=2 Tax=Natrinema RepID=I7D0S4_NATSJ
acetate/CoA ligase
Acetate/CoA ligase {ECO:0000313|EMBL:ELY75261.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_12_scaffold_144_28
unknown

Not on your lists

25982..26332
DNA (351bp) protein (117aa)

This feature has no annotations

sw_12_scaffold_144_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26408..27049
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20234.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying items 1-30 of 63 in total

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