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sw_12_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_210_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

sw_12_scaffold_210_2

Not on your lists

comp(336..1661)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MK99_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04696.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_210_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1699..2151)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SN89_9EURY
Pyridoxamine 5-phosphate oxidase family protein {ECO:0000313|EMBL:EMA54820.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
flavin-nucleotide-binding protein
sw_12_scaffold_210_4
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2288..2719
DNA (432bp) protein (144aa)
Bacterioopsin-linked protein blp n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LNF1_9EURY
Bacterioopsin-linked protein blp {ECO:0000313|EMBL:EMA34643.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ
hypothetical protein
sw_12_scaffold_210_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2748..4139)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ87_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93151.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
lysine biosynthesis regulator/ribosomal protein S6 modification enzyme (glutaminyl transferase)
sw_12_scaffold_210_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4357..5253)
DNA (897bp) protein (299aa)
Transcriptional regulator, XRE family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ8_HALMD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV46173.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
sw_12_scaffold_210_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5386..5973)
DNA (588bp) protein (196aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Probable deoxycytidine triphosphate deaminase {ECO:0000255|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000255|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000255|HAMAP-Rule:MF_00146};; TaxID=348780 s
Probable deoxycytidine triphosphate deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DCD_NATPD
sw_12_scaffold_210_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6097..6435
DNA (339bp) protein (113aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:CCQ36081.1}; EC=3.1.1.29 {ECO:0000313|EMBL:CCQ36081.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Peptidyl-tRNA hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPX2_NATM8
sw_12_scaffold_210_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6432..7514)
DNA (1083bp) protein (361aa)
NADPH dehydrogenase (OLD yellow enzyme); 2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34 1.6.99.1)
NamA family oxidoreductase (Homolog to old yellow enzyme) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMF4_NATPD
NamA family oxidoreductase {ECO:0000313|EMBL:CAI50704.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_12_scaffold_210_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7728..9953
DNA (2226bp) protein (742aa)
AAA-type ATPase (CDC48 subfamily) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQG9_NATPD
AAA-type ATPase (CDC48 subfamily) {ECO:0000313|EMBL:CAI49627.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
AAA-type ATPase (transitional ATPase homolog)
sw_12_scaffold_210_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9986..10540)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93470.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_210_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10753..11658)
DNA (906bp) protein (302aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP5_NATM8
pdxS; pyridoxal biosynthesis lyase PdxS
sw_12_scaffold_210_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11799..12233
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INB2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50391.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_12_scaffold_210_14
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12256..13485
DNA (1230bp) protein (410aa)
lysine-ketoglutarate reductase/saccharopine dehydrogenase (EC:1.5.1.10 1.5.1.7)
LOR/SDH bifunctional protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KR22_HALAR
LOR/SDH bifunctional protein {ECO:0000313|EMBL:EMA23676.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinens
sw_12_scaffold_210_15
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13482..13745)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RU80_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59149.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_12_scaffold_210_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13783..14175)
DNA (393bp) protein (131aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MRR1_9EURY
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ERG92814.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratu
UspA domain protein
sw_12_scaffold_210_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14763..15710
DNA (948bp) protein (316aa)
crtB; phytoene synthase (EC:2.5.1.32)
Phytoene synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7F8_9EURY
Phytoene synthase {ECO:0000313|EMBL:EMA53488.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
sw_12_scaffold_210_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15707..16558)
DNA (852bp) protein (284aa)
Carotene biosynthesis associated membrane protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAF9_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:EMA41380.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
carotenoid biosynthesis protein
sw_12_scaffold_210_19
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17328..18971)
DNA (1644bp) protein (548aa)
Phytoene desaturase n=1 Tax=Halobacterium sp. DL1 RepID=G4IGN0_9EURY
Phytoene dehydrogenase {ECO:0000313|EMBL:AHG04450.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
phytoene desaturase
sw_12_scaffold_210_20
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19249..19938
DNA (690bp) protein (230aa)
dehydrogenase/reductase 14 (EC:1.1.1.-)
Short-chain family oxidoreductase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H3E3_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELZ78323.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM
sw_12_scaffold_210_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19988..20842
DNA (855bp) protein (285aa)
Zinc transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF54_9EURY
Zinc transporter {ECO:0000313|EMBL:EMA43973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
zinc transporter
sw_12_scaffold_210_22
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20835..21332)
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IE06_9EURY
GNAT family acetyltransferase {ECO:0000313|EMBL:AHG04837.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. D
sortase-like acyltransferase
sw_12_scaffold_210_23
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21433..22080
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P3J3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39329.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
sw_12_scaffold_210_24
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22075..22845)
DNA (771bp) protein (257aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=797304 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ALG5_NATGS
dinuclear metal center protein
sw_12_scaffold_210_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22897..23703)
DNA (807bp) protein (269aa)
agmatinase (EC:3.5.3.11)
Agmatinase, putative n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQW8_9EURY
Agmatinase, putative {ECO:0000313|EMBL:EFW93382.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
sw_12_scaffold_210_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(23707..24084)
DNA (378bp) protein (126aa)
Translation initiation factor 5A n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ55_NATM8
tif5A; translation initiation factor aIF-5A
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
sw_12_scaffold_210_27
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24176..25237)
DNA (1062bp) protein (354aa)
Class I and II aminotransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWB3_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA36639.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
class I and II aminotransferase
sw_12_scaffold_210_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25286..26980)
DNA (1695bp) protein (565aa)
Ubiquinone biosynthesis protein UbiB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISC5_NATPD
ubiB_1; ubiquinone biosynthesis transmembrane protein 1
UbiB family protein {ECO:0000313|EMBL:CAI48962.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_12_scaffold_210_29
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26949..27305)
DNA (357bp) protein (119aa)
Hsp20-type molecular chaperone n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL19_NATM8
hsp20C; Hsp20-type molecular chaperone
Hsp20-type molecular chaperone {ECO:0000313|EMBL:CCQ36920.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_12_scaffold_210_30

Not on your lists

27409..28284
DNA (876bp) protein (292aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=14
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y3D5_9ARCH
Displaying items 1-30 of 45 in total

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