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sw_12_scaffold_231

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_231_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

194..820
DNA (627bp) protein (209aa)
Ribonuclease H, type 1 {ECO:0000313|EMBL:CAI48987.1}; EC=3.1.26.4 {ECO:0000313|EMBL:CAI48987.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Ribonuclease H, type 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISA1_NATPD
hypothetical protein
sw_12_scaffold_231_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(909..1502)
DNA (594bp) protein (198aa)
udp2; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Y2_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ28164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
sw_12_scaffold_231_3
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1784..4453
DNA (2670bp) protein (890aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=547559 species="Archaea; Euryarchae
Valine--tRNA ligase n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SS97_NATMM
valyl-tRNA synthetase
sw_12_scaffold_231_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4519..5862
DNA (1344bp) protein (448aa)
Nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBW5_9EURY
Nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase {ECO:0000313|EMBL:ESP88200.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candi
hypothetical protein
sw_12_scaffold_231_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6081..6824)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPW9_NATPD
topoisomerase cluster protein
Beta-lactamase domain protein {ECO:0000313|EMBL:CAI49829.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_12_scaffold_231_6
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6882..7622)
DNA (741bp) protein (247aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WUL1_9EURY
proteasome endopeptidase complex, archaeal, beta subunit
sw_12_scaffold_231_7
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7690..7848)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA14332.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_12_scaffold_231_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8125..8484
DNA (360bp) protein (120aa)
UPF0212 protein Hmuk_2742 n=2 Tax=Halomicrobium RepID=C7P056_HALMD
hypothetical protein
UPF0212 protein Hmuk_2742 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_12_scaffold_231_9
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8527..9066
DNA (540bp) protein (180aa)
Putative transcriptional regulator with C-terminal CBS domains n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IDU5_HALRX
putative transcriptional regulator with C-terminal CBS domains
Putative transcriptional regulator with C-terminal CBS domains {ECO:0000313|EMBL:AGB16142.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" sour
sw_12_scaffold_231_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9063..9671)
DNA (609bp) protein (203aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
Cytidylate kinase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E9H0_9EURY
cytidylate kinase
sw_12_scaffold_231_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9738..10715)
DNA (978bp) protein (326aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halogranum salarium B-1 RepID=J3EZW1_9EURY
sw_12_scaffold_231_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10772..11398)
DNA (627bp) protein (209aa)
metalloprotease (EC:3.4.24.-)
M50 family metalloprotease {ECO:0000313|EMBL:CAI49443.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI49443.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
M50 family metalloprotease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR01_NATPD
sw_12_scaffold_231_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11395..12903)
DNA (1509bp) protein (503aa)
TraB family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR02_NATPD
hypothetical protein
TraB family protein {ECO:0000313|EMBL:CAI49442.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_12_scaffold_231_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13032..13487
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TUS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59899.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_12_scaffold_231_15
unknown

Not on your lists

comp(13484..13621)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_12_scaffold_231_16
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13729..14304)
DNA (576bp) protein (192aa)
2-heptaprenyl-1,4-naphthoquinone methyltransferase n=2 Tax=Halarchaeum acidiphilum RepID=U3AFP0_9EURY
2-heptaprenyl-1,4-naphthoquinone methyltransferase {ECO:0000313|EMBL:GAD53603.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum
methyltransferase
sw_12_scaffold_231_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14378..14899
DNA (522bp) protein (174aa)
Acetyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LC04_HALJP
Acetyltransferase {ECO:0000313|EMBL:EMA29964.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
hat7; acetyltransferase
sw_12_scaffold_231_18
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14866..15444)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K4J8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15039.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_12_scaffold_231_19
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15520..15699
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000366B0AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ47489.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
sw_12_scaffold_231_20
unknown

Not on your lists

15768..15998
DNA (231bp) protein (77aa)

This feature has no annotations

sw_12_scaffold_231_21
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16060..16488)
DNA (429bp) protein (143aa)
UpsA domain-containing protein n=2 Tax=Haloferax RepID=M0ILS8_9EURY
UpsA domain-containing protein {ECO:0000313|EMBL:ELZ96414.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis AT
hypothetical protein
sw_12_scaffold_231_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16539..17042)
DNA (504bp) protein (168aa)
Isoleucine cluster protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4A5_9EURY
Isoleucine cluster protein {ECO:0000313|EMBL:EMA39210.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
homolog to ferripyochelin-binding protein
sw_12_scaffold_231_23
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17082..18044)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MH96_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA43805.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
DUF368 family protein
sw_12_scaffold_231_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18046..20982)
DNA (2937bp) protein (979aa)
Transmembrane oligosaccharyl transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ08_9EURY
Transmembrane oligosaccharyl transferase {ECO:0000313|EMBL:EMA44719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
transmembrane oligosaccharyl transferase
sw_12_scaffold_231_25
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21455..22036
DNA (582bp) protein (194aa)
Succinoglycan biosynthesis protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7N9_HALJP
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:EMA29556.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japon
glycosyl transferase family A
sw_12_scaffold_231_26
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22038..22871)
DNA (834bp) protein (278aa)
Sugar-specific transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KYI1_HALAR
Sugar-specific transcriptional regulator {ECO:0000313|EMBL:EMA29545.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
trmB2; sugar-specific transcriptional regulator
sw_12_scaffold_231_27
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23136..23378
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZFL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59480.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_231_28
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23436..23639
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Natrinema RepID=L9YGA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY90708.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
sw_12_scaffold_231_29
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23742..24827
DNA (1086bp) protein (362aa)
Homolog to aminomethyltransferase (Homolog to glycine cleavage system protein T) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y560_NATM8
gcvT; homolog to aminomethyltransferase (homolog to glycine cleavage system protein T)
Homolog to glycine cleavage system protein T {ECO:0000313|EMBL:CCQ37687.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natro
sw_12_scaffold_231_30
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(24839..25318)
DNA (480bp) protein (160aa)
RNA-binding protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GXF5_9EURY
RNA-binding protein {ECO:0000313|EMBL:ELZ75514.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
PUA domain-containing protein
Displaying items 1-30 of 31 in total

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