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sw_12_scaffold_244

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_244_1
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..180)
DNA (180bp) protein (60aa)
Trk-type K+ transport system, membrane component n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JIZ2_NATP1
Trk-type K+ transport system, membrane component
Trk-type K+ transport system, membrane component {ECO:0000313|EMBL:AGB30557.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema
sw_12_scaffold_244_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(185..877)
DNA (693bp) protein (231aa)
TRK potassium uptake system protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQH2_9EURY
Potassium transporter Trk {ECO:0000313|EMBL:KDS92179.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
TrkA-N domain protein
sw_12_scaffold_244_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1235..1975
DNA (741bp) protein (247aa)
Putative transcriptional regulator, AsnC family protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JJN2_NATP1
transcriptional regulator
Putative transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ELY77030.1}; Transcriptional regulator {ECO:0000313|EMBL:AGB30561.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacter
sw_12_scaffold_244_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2081..2986)
DNA (906bp) protein (302aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MBA1_HALMO
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EMA43006.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhu
putative metallo-beta-lactamase family hydrolase
sw_12_scaffold_244_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3105..4481
DNA (1377bp) protein (459aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IXJ8_9EURY
sw_12_scaffold_244_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4515..6527)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55416.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_244_7
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6636..7022)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CRE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25208.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_12_scaffold_244_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7116..7442)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E8Y1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02739.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_12_scaffold_244_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7494..7994
DNA (501bp) protein (167aa)
Probable ribosome biogenesis protein ZOD2009_02220 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNC6_9EURY
Probable ribosome biogenesis protein ZOD2009_02220 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sou
hypothetical protein
sw_12_scaffold_244_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7991..9010)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036823F3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46881.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_244_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9275..10411)
DNA (1137bp) protein (379aa)
mandelate racemase/muconate lactonizing protein id=24613559 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ESP90192.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" s
mandelate racemase/muconate lactonizing protein
sw_12_scaffold_244_12
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10471..11256
DNA (786bp) protein (262aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3W5_9EURY
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:ELY56151.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amyloly
enoyl-CoA hydratase/carnithine racemase
sw_12_scaffold_244_13
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11253..12452
DNA (1200bp) protein (400aa)
Formyl-CoA transferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XGQ6_9EURY
Formyl-CoA transferase {ECO:0000313|EMBL:ELY60900.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 1879
putative acyl-CoA transferase/carnitine dehydratase
sw_12_scaffold_244_14
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12529..14445
DNA (1917bp) protein (639aa)
ABC transporter ATP-binding protein n=2 Tax=Halorubrum distributum RepID=M0EQP9_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ48764.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distribu
ABC-type transport system ATP-binding/permease protein
Displaying 14 items

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