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sw_12_scaffold_41

Search features with annotation key words

Displaying items 121-150 of 188 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_41_120
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

110418..110780
DNA (363bp) protein (121aa)
Arabinose efflux permease n=1 Tax=halophilic archaeon J07HB67 RepID=U1R0Q8_9EURY
Arabinose efflux permease {ECO:0000313|EMBL:ERH11852.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
multidrug resistance protein-like protein
sw_12_scaffold_41_121
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

111240..112193
DNA (954bp) protein (318aa)
TRAP-type transport system,periplasmic protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E1Q7_9EURY
TRAP-type transport system,periplasmic protein {ECO:0000313|EMBL:ELZ41730.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
imp; TRAP-type transport system periplasmic substrate-binding protein
sw_12_scaffold_41_122
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

112323..112835
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E5T5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ41729.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_12_scaffold_41_123
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

112832..115417
DNA (2586bp) protein (862aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000380243A
TRAP transporter 4TM/12TM fusion protein {ECO:0000313|EMBL:ELZ41728.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sac
TRAP-type transport system, permease
sw_12_scaffold_41_124
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(115564..115689)
DNA (126bp) protein (42aa)
Fjo21 n=1 Tax=Halogranum salarium B-1 RepID=J2ZJS8_9EURY
Fjo21 {ECO:0000313|EMBL:EJN60975.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_41_125
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(115728..116573)
DNA (846bp) protein (282aa)
Fjo21 n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0H937_9EURY
Fjo21 {ECO:0000313|EMBL:ELZ80252.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
hypothetical protein
sw_12_scaffold_41_126
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(116566..116928)
DNA (363bp) protein (121aa)
ArsR family transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD23_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ21145.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
ArsR family transcriptional regulator
sw_12_scaffold_41_127
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

116964..118541
DNA (1578bp) protein (526aa)
Mercuric reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCZ1_9EURY
Mercuric reductase {ECO:0000313|EMBL:ELZ21146.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
mercuric reductase
sw_12_scaffold_41_128
unknown

Not on your lists

118732..118890
DNA (159bp) protein (53aa)

This feature has no annotations

sw_12_scaffold_41_129
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(119118..119414)
DNA (297bp) protein (99aa)
GAF sensor signal transduction histidine kinase id=24655772 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
PAS sensor histidine kinase {ECO:0000313|EMBL:ERG89175.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
histidine kinase
sw_12_scaffold_41_130
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

119511..120896
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037880B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48880.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_41_131
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(120938..122170)
DNA (1233bp) protein (411aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X7V1_9EURY
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ELY56708.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus am
alcohol dehydrogenase, class IV
sw_12_scaffold_41_132
unknown

Not on your lists

comp(122238..122441)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_12_scaffold_41_133
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(122441..124297)
DNA (1857bp) protein (619aa)
Aldehyde ferredoxin oxidoreductase n=1 Tax=halophilic archaeon DL31 RepID=G2MKM2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01231.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_12_scaffold_41_134
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(124370..125680)
DNA (1311bp) protein (437aa)
acetylornithine transaminase (EC:2.6.1.11)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3H2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56324.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
sw_12_scaffold_41_135
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(125762..126355)
DNA (594bp) protein (198aa)
Regulatory protein TetR n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQW2_HALMO
Regulatory protein TetR {ECO:0000313|EMBL:EMA48107.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
TetR family transcriptional regulator
sw_12_scaffold_41_136
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(126402..128921)
DNA (2520bp) protein (840aa)
Rnd superfamily exporter n=1 Tax=Halogranum salarium B-1 RepID=J2ZL81_9EURY
Rnd superfamily exporter {ECO:0000313|EMBL:EJN61505.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
rnd superfamily exporter
sw_12_scaffold_41_137
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(128918..130489)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JI34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61506.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_41_138
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

130682..131539
DNA (858bp) protein (286aa)
tssA1; thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NNE7_9EURY
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
sw_12_scaffold_41_139
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

131674..132555
DNA (882bp) protein (294aa)
rfbB3; dTDP-glucose-46-dehydratase (EC:4.2.1.46)
dTDP-glucose-46-dehydratase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K363_9EURY
dTDP-glucose-46-dehydratase {ECO:0000313|EMBL:EMA15238.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis A
sw_12_scaffold_41_140
unknown

Not on your lists

comp(132643..132831)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_12_scaffold_41_141
unknown

Not on your lists

132896..133129
DNA (234bp) protein (78aa)

This feature has no annotations

sw_12_scaffold_41_142
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(133151..133570)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IV50_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA00591.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_12_scaffold_41_143
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

133659..134411
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JPA3_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB32678.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellir
sw_12_scaffold_41_144
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(134413..135714)
DNA (1302bp) protein (434aa)
Major facilitator superfamily protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CYY2_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELZ28430.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
major facilitator superfamily transporter
sw_12_scaffold_41_145
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(135714..138074)
DNA (2361bp) protein (787aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CYX1_9EURY
Gamma-glutamyltransferase {ECO:0000313|EMBL:ELZ28431.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
sw_12_scaffold_41_146
unknown

Not on your lists

138094..138258
DNA (165bp) protein (55aa)

This feature has no annotations

sw_12_scaffold_41_147
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(138352..139668)
DNA (1317bp) protein (439aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Halogranum salarium B-1 RepID=J3JCZ8_9EURY
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EJN57051.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum s
sw_12_scaffold_41_148
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(139661..140710)
DNA (1050bp) protein (350aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Halogranum salarium B-1 RepID=J3EST3_9EURY
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EJN57052.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum s
sw_12_scaffold_41_149
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(140707..141711)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZVJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57053.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
Displaying items 121-150 of 188 in total

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