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sw_12_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 188 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_41_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..522
DNA (522bp) protein (174aa)
Universal archaeal kh-domain/beta-lactamase-domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CY08_9EURY
Universal archaeal kh-domain/beta-lactamase-domain-containing protein {ECO:0000313|EMBL:ELZ27332.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeo
metallo-beta-lactamase family protein, RNA-specific
sw_12_scaffold_41_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

571..1278
DNA (708bp) protein (236aa)
DSBA-like thioredoxin n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HHB4_9EURY
DSBA-like thioredoxin {ECO:0000313|EMBL:ESP87259.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
trx; DSBA-like thioredoxin
sw_12_scaffold_41_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1297..1710)
DNA (414bp) protein (138aa)
DUF371 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP31_NATPD
hypothetical protein
DUF371 family protein {ECO:0000313|EMBL:CAI50121.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_12_scaffold_41_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2007..2897
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLC2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37454.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_12_scaffold_41_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3202..3438)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27177.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
sw_12_scaffold_41_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3518..4510
DNA (993bp) protein (331aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFA9_9EURY
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:ELY60405.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus
sppA_1; signal peptide peptidase
sw_12_scaffold_41_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4595..5719
DNA (1125bp) protein (375aa)
DUF373 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUA0_NATPD
hypothetical protein
DUF373 family protein {ECO:0000313|EMBL:CAI48281.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_12_scaffold_41_8
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5758..6474
DNA (717bp) protein (239aa)
ATP binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YCL3_9EURY
ATP binding protein {ECO:0000313|EMBL:ELY71447.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
sw_12_scaffold_41_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6479..7444)
DNA (966bp) protein (322aa)
Nucleotidyl transferase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQE5_HALUD
Nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACV12871.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_12_scaffold_41_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7540..8484
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYR8_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35273.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_12_scaffold_41_11
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8481..8945)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X6L3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY57350.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_12_scaffold_41_12
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8942..10678)
DNA (1737bp) protein (579aa)
DNA polymerase IV n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JUP1_9EURY
DNA polymerase IV {ECO:0000313|EMBL:EMA11684.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.
polX; DNA polymerase IV
sw_12_scaffold_41_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10675..11112)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK52_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35276.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_12_scaffold_41_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11356..12690
DNA (1335bp) protein (445aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227487 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CV94_9EURY
hypothetical protein
sw_12_scaffold_41_15
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12831..13400
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003768EDC
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKF40106.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source=
sw_12_scaffold_41_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13686..14894
DNA (1209bp) protein (403aa)
Cell division protein FtsZ n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN79_NATM8
ftsZ1; cell division protein FtsZ, type I
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_12_scaffold_41_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15025..15198
DNA (174bp) protein (58aa)
Protein translocase subunit SecE n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P127_HALMD
protein translocase SEC61 complex subunit gamma
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=485914 species="Archaea; Euryarchaeot
sw_12_scaffold_41_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15198..15635
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVY0_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
nusG; transcription antitermination protein NusG
sw_12_scaffold_41_19
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16101..17441
DNA (1341bp) protein (447aa)
DNA repair protein Rad25 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KTP4_9EURY
DNA repair protein Rad25 {ECO:0000313|EMBL:EMA23095.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
helicase
sw_12_scaffold_41_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17441..18973
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP80_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25060.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_41_21
unknown

Not on your lists

comp(18970..19464)
DNA (495bp) protein (165aa)

This feature has no annotations

sw_12_scaffold_41_22
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19576..20088)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HK97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ84980.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
sw_12_scaffold_41_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20085..20990)
DNA (906bp) protein (302aa)
cna; tRNA/rRNA cytosine-C5-methylase (EC:2.1.1.-)
tRNA and rRNA cytosine-C5-methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR15_9EURY
tRNA and rRNA cytosine-C5-methylase {ECO:0000313|EMBL:ELZ25058.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
sw_12_scaffold_41_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21055..21240)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NH42_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55965.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_12_scaffold_41_25
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21548..22639
DNA (1092bp) protein (364aa)
Water stress and Hypersensitive response domain protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NS08_9EURY
Water stress and Hypersensitive response domain protein {ECO:0000313|EMBL:EMA60752.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source=
hypothetical protein
sw_12_scaffold_41_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22704..23117
DNA (414bp) protein (138aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Natronomonas pharaonis RepID=Q3INK6_NATPD
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
sw_12_scaffold_41_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23114..24265
DNA (1152bp) protein (384aa)
aspC_3; aspartate aminotransferase (EC:2.6.1.1)
Pyridoxal phosphate-dependent aminotransferase (Probable aspartate aminotransferase) {ECO:0000313|EMBL:CAI50296.1}; EC=2.6.1.- {ECO:0000313|EMBL:CAI50296.1};; TaxID=348780 species="Archaea; Euryarchae
Pyridoxal phosphate-dependent aminotransferase (Probable aspartate aminotransferase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INK7_NATPD
sw_12_scaffold_41_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24256..25785)
DNA (1530bp) protein (510aa)
Sensor/bat box HTH-10 family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INK9_NATPD
GAF domain-containing protein
Sensor/bat box HTH-10 family transcription regulator {ECO:0000313|EMBL:CAI50294.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sourc
sw_12_scaffold_41_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25830..27728)
DNA (1899bp) protein (633aa)
RecJ domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ93_NATPD
hypothetical protein
DHH/RecJ family phosphoesterase {ECO:0000313|EMBL:CAI49703.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_12_scaffold_41_30
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27890..28378
DNA (489bp) protein (163aa)
Proteasome Rpn11 subunit JAMM motif protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4J9_HALMD
proteasome Rpn11 subunit JAMM motif protein
Proteasome Rpn11 subunit JAMM motif protein {ECO:0000313|EMBL:ACV48021.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
Displaying items 1-30 of 188 in total

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