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sw_12_scaffold_414

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_414_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..919
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NX89_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46454.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_414_2
unknown

Not on your lists

comp(965..1171)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_12_scaffold_414_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1251..1991)
DNA (741bp) protein (247aa)
dehydrogenase/reductase 12 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI48342.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI48342.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU41_NATPD
sw_12_scaffold_414_4
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2069..3511
DNA (1443bp) protein (481aa)
NifU-like domain-containing protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HGZ5_9EURY
NifU-like domain-containing protein {ECO:0000313|EMBL:ELZ83786.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii
NifU-like domain-containing protein
sw_12_scaffold_414_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3508..4881)
DNA (1374bp) protein (458aa)
RNA-binding protein AU-1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=AUBA_NATPD
hypothetical protein
RNA-binding protein AU-1 {ECO:0000255|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000255|HAMAP-Rule:MF_01910}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
sw_12_scaffold_414_6
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4878..5249)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R1K1_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK18111.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_12_scaffold_414_7
unknown

Not on your lists

5730..5954
DNA (225bp) protein (75aa)

This feature has no annotations

sw_12_scaffold_414_8
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6025..6795)
DNA (771bp) protein (257aa)
3-oxoacyl-ACP reductase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IH62_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ELZ96110.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
fabG2; 3-oxoacyl-ACP reductase
sw_12_scaffold_414_9
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6875..8377)
DNA (1503bp) protein (501aa)
Thioredoxin reductase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JIF7_NATP1
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:AGB31104.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 156
sw_12_scaffold_414_10
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8483..8770
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Natrinema RepID=I7BV24_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO56765.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_12_scaffold_414_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8899..10242
DNA (1344bp) protein (448aa)
Extracellular ligand-binding receptor n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR09_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA48036.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
ABC-type branched-chain amino acid transport system, periplasmic component
sw_12_scaffold_414_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10257..11120
DNA (864bp) protein (288aa)
Inner-membrane translocator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEB6_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:EMA55903.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
branched-chain amino acid ABC transporter permease
sw_12_scaffold_414_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11142..12278
DNA (1137bp) protein (379aa)
Inner-membrane translocator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M312_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:EMA38790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
inner-membrane translocator
sw_12_scaffold_414_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12268..13038
DNA (771bp) protein (257aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRR7_9EURY
ABC transporter {ECO:0000313|EMBL:EMA48033.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
branched-chain amino acid ABC transporter ATP-binding protein
sw_12_scaffold_414_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13035..13742
DNA (708bp) protein (236aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M025_9EURY
ABC transporter {ECO:0000313|EMBL:EMA38788.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC transporter
sw_12_scaffold_414_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13967..14944
DNA (978bp) protein (326aa)
Transcription initiation factor IIB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ14_NATM8
tfbA5; transcription initiation factor TFB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_12_scaffold_414_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15125..15301
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPX8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93042.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
small CPxCG-related zinc finger protein
sw_12_scaffold_414_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15392..15793)
DNA (402bp) protein (134aa)
Translation initiation factor 2 subunit beta n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF2B_NATPD
tif2b; translation initiation factor IF-2 subunit beta
Translation initiation factor 2 subunit beta {ECO:0000255|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000255|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000255|HAMAP-Rule:MF_00232}; TaxID=348780 species="Archaea
sw_12_scaffold_414_19
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15963..16205
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JRQ4_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46115.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_12_scaffold_414_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16287..17204
DNA (918bp) protein (306aa)
3-methyladenine DNA glycosylase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJW1_9EURY
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:ELZ34449.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pa
3-methyladenine DNA glycosylase
sw_12_scaffold_414_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17434..17718
DNA (285bp) protein (95aa)
acyP; acylphosphatase (EC:3.6.1.7)
Acylphosphatase {ECO:0000313|EMBL:CCQ37010.1}; EC=3.6.1.7 {ECO:0000313|EMBL:CCQ37010.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;"
Acylphosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRV0_NATM8
sw_12_scaffold_414_22
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17715..18491)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GRC9_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE02130.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_12_scaffold_414_23
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18796..20223
DNA (1428bp) protein (476aa)
YjeF-like protein, hydroxyethylthiazole kinase-related n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NNB4_HALBP
yjef-like protein, hydroxyethylthiazole kinase-related
YjeF-like protein, hydroxyethylthiazole kinase-related {ECO:0000313|EMBL:ADQ67452.1}; Yjef-like protein {ECO:0000313|EMBL:ELY23273.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Halof
sw_12_scaffold_414_24
unknown

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20285..20617
DNA (333bp) protein (111aa)

This feature has no annotations

sw_12_scaffold_414_25
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21297..22268
DNA (972bp) protein (324aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostag
DNA methylase N-4/N-6 domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MJ84_9ARCH
DNA methylase
sw_12_scaffold_414_26

Not on your lists

comp(22306..23010)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MJ83_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04632.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_414_27
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23171..23494)
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E5U6_9EURY
transcription termination factor Tfs
sw_12_scaffold_414_28
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23536..23922)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Haloferax sp. BAB2207 RepID=L5NHY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELK50030.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
hypothetical protein
sw_12_scaffold_414_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23919..24635)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU8_NATPD
rad50 ATPase
CopG domain protein {ECO:0000313|EMBL:CAI50558.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_12_scaffold_414_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24692..25528)
DNA (837bp) protein (279aa)
Homolog to KaiC-like transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT39_NATM8
homolog to KaiC-like transcription regulator
Uncharacterized protein {ECO:0000313|EMBL:CCQ37567.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
Displaying items 1-30 of 37 in total

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