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sw_12_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 90 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_7_1
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..1765
DNA (1764bp) protein (588aa)
Formate dehydrogenase alpha subunit n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JR51_9EURY
Formate dehydrogenase alpha subunit {ECO:0000313|EMBL:EMA10469.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula calif
fdhG; formate dehydrogenase alpha subunit
sw_12_scaffold_7_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1762..2151)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_12_scaffold_7_3

Not on your lists

comp(2239..3573)
DNA (1335bp) protein (445aa)
Formate-tetrahydrofolate ligase {ECO:0000313|EMBL:ESS06943.1}; EC=6.3.4.3 {ECO:0000313|EMBL:ESS06943.1};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;
fhs; formyltetrahydrofolate synthetase (EC:6.3.4.3)
Formate-tetrahydrofolate ligase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XXE2_9ARCH
sw_12_scaffold_7_4

Not on your lists

4094..6487
DNA (2394bp) protein (798aa)
folP3; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y7A8_9ARCH
Dihydropteroate synthase {ECO:0000313|EMBL:ESS06942.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_7_5

Not on your lists

comp(6500..6919)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y2T2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06941.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_12_scaffold_7_6
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7033..7599
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YMA1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ERH05023.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
sw_12_scaffold_7_7

Not on your lists

7631..7846
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XVP8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS12709.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_12_scaffold_7_8

Not on your lists

comp(7925..9688)
DNA (1764bp) protein (588aa)
Choline/carnitine/betaine transport n=1 Tax=uncultured archaeon A07HB70 RepID=V4XXD7_9ARCH
Choline/carnitine/betaine transport {ECO:0000313|EMBL:ESS06938.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
glycine/betaine ABC transporter
sw_12_scaffold_7_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10071..10232
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMA4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA08815.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_12_scaffold_7_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10295..10738)
DNA (444bp) protein (148aa)
Universal stress protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D7J7_9EURY
Universal stress protein {ECO:0000313|EMBL:ELZ31465.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
usp25; universal stress protein
sw_12_scaffold_7_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11146..12393)
DNA (1248bp) protein (416aa)
Threonine dehydratase {ECO:0000313|EMBL:ELZ32576.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ELZ32576.1};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometr
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAV8_9EURY
sw_12_scaffold_7_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12390..14942)
DNA (2553bp) protein (851aa)
Sacrosine dehydrogenase/glycine cleavage T-protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L732_HALJP
Sacrosine dehydrogenase/glycine cleavage T-protein {ECO:0000313|EMBL:EMA27770.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
glycine cleavage system protein T
sw_12_scaffold_7_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15124..17619)
DNA (2496bp) protein (832aa)
gcvT3; sacrosine dehydrogenase/glycine cleavage T-protein (EC:2.1.2.10 1.5.3.1)
Sacrosine dehydrogenase/glycine cleavage T protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KA93_9EURY
Sacrosine dehydrogenase/glycine cleavage T protein {ECO:0000313|EMBL:EMA18312.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
sw_12_scaffold_7_14
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17816..18202)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U4Z8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27506.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_12_scaffold_7_15
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18274..19221
DNA (948bp) protein (316aa)
Serine protease n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V5Z5_HALMA
htrA2; serine protease
Serine protease {ECO:0000313|EMBL:AAV45057.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC
sw_12_scaffold_7_16
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19327..20331
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JNZ6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27494.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_12_scaffold_7_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20404..21258
DNA (855bp) protein (285aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
5,10-methylenetetrahydrofolate reductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L2L1_HALJP
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:EMA27776.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_12_scaffold_7_18
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21367..22788
DNA (1422bp) protein (474aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMQ2_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10427.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livH3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_12_scaffold_7_19
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22788..24551
DNA (1764bp) protein (588aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JPW8_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10428.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_12_scaffold_7_20
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24548..25516
DNA (969bp) protein (323aa)
ABC-type branched-chain amino acid transport system, ATP-binding protein II n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JR11_9EURY
ABC-type branched-chain amino acid transport system, ATP-binding protein II {ECO:0000313|EMBL:EMA10429.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
sw_12_scaffold_7_21
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25518..26225
DNA (708bp) protein (236aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JRZ3_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA10430.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF3; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_12_scaffold_7_22
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26255..27457)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JN36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA10431.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_12_scaffold_7_23
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27533..28819)
DNA (1287bp) protein (429aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=2 Tax=Haloarcula RepID=M0JMQ8_9EURY
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA10432.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloar
livJ; ABC-type branched-chain amino acid transport systems, substrate-binding protein
sw_12_scaffold_7_24
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28873..29682)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A2DCF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA48859.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
sw_12_scaffold_7_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29711..30175
DNA (465bp) protein (155aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVQ8_9EURY
sw_12_scaffold_7_26
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30182..30772)
DNA (591bp) protein (197aa)
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MER4_HALMO
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:EMA42900.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
formiminotransferase-cyclodeaminase
sw_12_scaffold_7_27
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30826..31842)
DNA (1017bp) protein (339aa)
Aminomethyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JM92_HALVA
Aminomethyltransferase {ECO:0000313|EMBL:EMA08805.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
glycine cleavage system protein T
sw_12_scaffold_7_28
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31848..32108)
DNA (261bp) protein (87aa)
Homolog to aminomethyltransferase (Homolog to glycine cleavage system protein T) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LKF1_HALWC
gcvT3; homolog to aminomethyltransferase (homolog to glycine cleavage system protein T)
Homolog to glycine cleavage system protein T {ECO:0000313|EMBL:CAJ51984.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquad
sw_12_scaffold_7_29
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32363..32653
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DMQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36083.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
sw_12_scaffold_7_30
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33160..34008)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12169.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
Displaying items 1-30 of 90 in total

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