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sw_12_scaffold_1_22

Organism: SW_12_Halobacteriales_67_41

near complete RP 32 / 55 MC: 3 BSCG 29 / 51 MC: 3 ASCG 38 / 38
Location: 20209..20754

Top 3 Functional Annotations

Value Algorithm Source
CopG family ribbon-helix-helix transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAR7_HALMT similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 180.0
  • Bit_score: 225
  • Evalue 5.80e-56
CopG family ribbon-helix-helix transcription regulator similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 180.0
  • Bit_score: 225
  • Evalue 1.60e-56
CopG family ribbon-helix-helix transcription regulator {ECO:0000313|EMBL:AFK21327.1}; CopG family transcriptional regulator {ECO:0000313|EMBL:AHZ24584.1}; TaxID=523841 species="Archaea; Euryarchaeota; similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 180.0
  • Bit_score: 225
  • Evalue 8.10e-56

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Taxonomy

Haloferax mediterranei → Haloferax → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 546
ATGGTAAAGGATCGAGTCACCGTTTCCCTTGATGAAGATGCAAAAGGGGCGTTGGAGAGGCTGGTAAGTCAAACTGGGAAGGGGAACAGCGAGCTTGTCCGGAAGGCGCTTTCTTTCTACGCCGCAAACCAGCAAGTCGCTAGTTCGGACGTGAATCTCGATTTAGAGGAGTATCACAAAATGCTCGCGAGCGGGGAGCACGCACTGCTGGACATTGACTTCCTCCATACGCTTCTTAAATACACCCCTGATGAAGGAGAAGAGGCTGAAGCATTCACCGAAGACTTAGATCGCGTCGCTGAGTACCACGCTGCTGAATACGCGAGACGGTTTAATACACTCGAGGAGGTTCTCGATTGGCTCTCAATATGCGGGTTTCTCACCGTTCGAGAAAGTAGTGCGAACACCTATCATATCGTCTTTCCCACAGAGGACGTGAGGTGGTTTATGCTCCGATTTCTCCAACAAAGTACGACCGAACTCCCATTCGATCTTGAGATTGATCAAGGCGTCTCGAAGGTACTGTTACGCACCGTTTCAGAGTGA
PROTEIN sequence
Length: 182
MVKDRVTVSLDEDAKGALERLVSQTGKGNSELVRKALSFYAANQQVASSDVNLDLEEYHKMLASGEHALLDIDFLHTLLKYTPDEGEEAEAFTEDLDRVAEYHAAEYARRFNTLEEVLDWLSICGFLTVRESSANTYHIVFPTEDVRWFMLRFLQQSTTELPFDLEIDQGVSKVLLRTVSE*