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sw_12_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 115 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

141..938
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P559_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49454.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_1_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

948..1697
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JT50_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33787.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellir
sw_12_scaffold_1_3

Not on your lists

1748..2404
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWI5_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS07310.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_1_4

Not on your lists

comp(2365..3369)
DNA (1005bp) protein (335aa)
Transfer complex protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQ22_9ARCH
transfer complex protein
Transfer complex protein {ECO:0000313|EMBL:AEN07791.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_1_5
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3385..3843)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YY92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD53767.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
transfer complex protein
sw_12_scaffold_1_6
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3840..4175)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0ACU7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY96221.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
hypothetical protein
sw_12_scaffold_1_7
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4262..4972)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X9P5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY35371.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_12_scaffold_1_8
unknown

Not on your lists

5802..6179
DNA (378bp) protein (126aa)

This feature has no annotations

sw_12_scaffold_1_9
Halorubrum sp. T3, Halorubrum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7002..7685
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000370A62D
sw_12_scaffold_1_10

Not on your lists

comp(7699..8364)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MIJ7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04778.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_1_11
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9065..9949)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRQ9_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33924.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_12_scaffold_1_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10908..11963)
DNA (1056bp) protein (352aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ana
Polyamine ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGV8_9FIRM
spermidine/putrescine ABC transporter ATPase
sw_12_scaffold_1_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12113..13321
DNA (1209bp) protein (403aa)
Spermidine/putrescine ABC transporter n=1 Tax=Halobacterium sp. DL1 RepID=G4IIP4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05158.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
spermidine/putrescine ABC transporter
sw_12_scaffold_1_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13326..14195
DNA (870bp) protein (290aa)
ABC spermidine/putrescine transporter, inner membrane subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1A9_9PROT
ABC spermidine/putrescine transporter, inner membrane subunit {ECO:0000313|EMBL:EDP61849.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199
putative polyamine ABC transporter, permease protein
sw_12_scaffold_1_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14195..14986
DNA (792bp) protein (264aa)
ABC transporter, permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U3R2_9RHIZ
ABC transporter, permease protein {ECO:0000313|EMBL:ENN84953.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
potI; putrescine ABC transporter permease
sw_12_scaffold_1_16
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14990..15610
DNA (621bp) protein (207aa)
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VUN5_9EURY
Pyrrolidone-carboxylate peptidase {ECO:0000313|EMBL:ELY40741.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibete
sw_12_scaffold_1_17
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15607..16413)
DNA (807bp) protein (269aa)
creatinine amidohydrolase (EC:3.5.2.10)
Creatinine amidohydrolase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EA10_9EURY
Creatinine amidohydrolase {ECO:0000313|EMBL:ELZ44631.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284
sw_12_scaffold_1_18

Not on your lists

comp(16685..18016)
DNA (1332bp) protein (444aa)
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y9S5_9ARCH
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:ESS09596.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
5-oxoprolinase
sw_12_scaffold_1_19
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18082..18549)
DNA (468bp) protein (156aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEH38023.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEH38023.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halo
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8V9_HALXS
sw_12_scaffold_1_20
unknown

Not on your lists

18603..18818
DNA (216bp) protein (72aa)

This feature has no annotations

sw_12_scaffold_1_21
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18815..20032)
DNA (1218bp) protein (406aa)
N-methylhydaintoinase (ATP-hydrolyzing) A n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUY8_9EURY
5-oxoprolinase
5-oxoprolinase {ECO:0000313|EMBL:AHF99175.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
sw_12_scaffold_1_22
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20209..20754
DNA (546bp) protein (182aa)
CopG family ribbon-helix-helix transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAR7_HALMT
CopG family ribbon-helix-helix transcription regulator
CopG family ribbon-helix-helix transcription regulator {ECO:0000313|EMBL:AFK21327.1}; CopG family transcriptional regulator {ECO:0000313|EMBL:AHZ24584.1}; TaxID=523841 species="Archaea; Euryarchaeota;
sw_12_scaffold_1_23
unknown

Not on your lists

comp(20712..20960)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_12_scaffold_1_24
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21602..22219)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LW56_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58446.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_12_scaffold_1_25
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22315..22536
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DSR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ38510.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_12_scaffold_1_26
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22645..24873
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LN51_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC41521.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_12_scaffold_1_27
unknown

Not on your lists

24827..25045
DNA (219bp) protein (73aa)

This feature has no annotations

sw_12_scaffold_1_28
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25257..25826)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ICQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE56788.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
conserved hypothetical protein (DUF45)
sw_12_scaffold_1_29
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25823..26446)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DTT8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ38263.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
OB-fold nucleic acid binding domain protein
sw_12_scaffold_1_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27109..28428
DNA (1320bp) protein (440aa)
SEC-C motif domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY23_9EURY
SEC-C motif domain-containing protein {ECO:0000313|EMBL:EMA50218.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus th
hypothetical protein
Displaying items 1-30 of 115 in total

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