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sw_12_scaffold_2015

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_2015_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..90
DNA (90bp) protein (30aa)
Sigma-54 dependent DNA-binding response regulator, Fis family {ECO:0000313|EMBL:CBH24849.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
sw_12_scaffold_2015_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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216..629
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000380B932
S23 ribosomal protein Tax=RBG_16_Chloroflexi_63_12_curated
S23 ribosomal protein
sw_12_scaffold_2015_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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670..2019
DNA (1350bp) protein (450aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Two-component system sensor histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z2_SALRM
two-component system sensor histidine kinase
sw_12_scaffold_2015_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2118..3563)
DNA (1446bp) protein (482aa)
DNA damage-inducible protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z0_SALRM
matE; DNA damage-inducible protein
DNA damage-inducible protein {ECO:0000313|EMBL:CBH24845.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_2015_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4306..5124
DNA (819bp) protein (273aa)
SPFH domain / Band 7 family protein n=2 Tax=Salinibacter ruber RepID=Q2S1U3_SALRD
HflC; stomatin-like transmembrane protein
SPFH domain / Band 7 family protein {ECO:0000313|EMBL:ABC44202.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_12_scaffold_2015_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5155..5703
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4B5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44292.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_2015_7
Thermocrinis albus, Thermocrinis, Aquificales, Aquificae, Aquificae, Bacteria

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comp(5759..6181)
DNA (423bp) protein (141aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SLZ7_THEAH
OB-fold tRNA/helicase-type nucleic acid binding protein
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ADC89777.1}; TaxID=638303 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Thermocrinis.;" source="Thermocrinis albus (strain
sw_12_scaffold_2015_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6252..8273)
DNA (2022bp) protein (674aa)
Acylaminoacyl-peptidase {ECO:0000313|EMBL:ABC45205.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
acylaminoacyl-peptidase id=24658346 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
acylaminoacyl-peptidase
Displaying 8 items

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