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sw_12_scaffold_250

Search features with annotation key words

Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_250_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..202
DNA (201bp) protein (67aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446, ECO:0000313|EMBL:CBH25110.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes
Isocitrate dehydrogenase [NADP] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAQ5_SALRM
icd; isocitrate dehydrogenase
sw_12_scaffold_250_2
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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422..868
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037C1FBF
Uncharacterized protein {ECO:0000313|EMBL:BAD71046.1}; TaxID=300852 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain HB8 / ATC
hypothetical protein
sw_12_scaffold_250_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1310..1957
DNA (648bp) protein (216aa)
NUDIX family hydrolase
NUDIX family hydrolase id=24657902 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hydrolase, NUDIX family protein {ECO:0000313|EMBL:ABC43664.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_12_scaffold_250_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2329..3057
DNA (729bp) protein (243aa)
Transcriptional regulator, HTH motif n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7N7_SALRM
transcriptional regulator
Transcriptional regulator, HTH motif {ECO:0000313|EMBL:CBH24042.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_12_scaffold_250_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3099..4760
DNA (1662bp) protein (554aa)
Outer membrane efflux protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S421_SALRD
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABC45096.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_12_scaffold_250_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4880..5989
DNA (1110bp) protein (370aa)
Membrane-fusion protein
RND family efflux transporter MFP subunit id=24657808 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Membrane-fusion protein {ECO:0000313|EMBL:CBH24040.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_250_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6124..10053
DNA (3930bp) protein (1310aa)
Multidrug resistance protein, putative n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7N4_SALRM
acrB; multidrug resistance protein
Multidrug resistance protein, putative {ECO:0000313|EMBL:CBH24039.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_12_scaffold_250_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10421..11614
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S424_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44330.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_250_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11637..13115
DNA (1479bp) protein (493aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S425_SALRD
mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:ABC45294.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
sw_12_scaffold_250_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13116..13679)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW79_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55255.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
sw_12_scaffold_250_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13763..14665)
DNA (903bp) protein (301aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=2 Tax=Salinibacter ruber RepID=D5H7N0_SALRM
hypothetical protein
Truncated methionine synthase-like protein {ECO:0000313|EMBL:ABC45913.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
Displaying 11 items

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