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sw_12_scaffold_369

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_369_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(323..1393)
DNA (1071bp) protein (357aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P3_SALRM
trmD; tRNA (guanine-N(1)-)-methyltransferase
sw_12_scaffold_369_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1464..2057)
DNA (594bp) protein (198aa)
Ribosome maturation factor RimM n=2 Tax=Salinibacter ruber RepID=RIMM_SALRD
rimM; 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
sw_12_scaffold_369_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2088..2639)
DNA (552bp) protein (184aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=24659588 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBH24750.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_12_scaffold_369_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2710..4095)
DNA (1386bp) protein (462aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S231_SALRD
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
sw_12_scaffold_369_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4490..5068
DNA (579bp) protein (193aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1};; TaxID=761659 species="Bact
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P7_SALRM
5-formyltetrahydrofolate cyclo-ligase
sw_12_scaffold_369_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5120..5785
DNA (666bp) protein (222aa)
PspC domain family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S229_SALRD
PspC domain-containing protein
PspC domain family {ECO:0000313|EMBL:ABC45415.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_12_scaffold_369_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5766..7103)
DNA (1338bp) protein (446aa)
Putative zinc protease {ECO:0000313|EMBL:CBH24754.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24754.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Putative zinc protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P9_SALRM
zinc protease
sw_12_scaffold_369_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7231..8547)
DNA (1317bp) protein (439aa)
Zinc protease n=2 Tax=Salinibacter ruber RepID=D5H9Q0_SALRM
protease
Protease, putative {ECO:0000313|EMBL:ABC45445.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_12_scaffold_369_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8646..11423)
DNA (2778bp) protein (926aa)
DNA polymerase I {ECO:0000313|EMBL:CBH24757.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH24757.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
DNA polymerase I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q2_SALRM
polA; DNA polymerase I
sw_12_scaffold_369_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11682..12365
DNA (684bp) protein (228aa)
Hydrolase, haloacid dehalogenase-like family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S225_SALRD
HAD superfamily hydrolase
Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:ABC44189.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
sw_12_scaffold_369_11
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13874..15031
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZYB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHM63037.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
sw_12_scaffold_369_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15157..17274
DNA (2118bp) protein (706aa)
Blue (Type 1) copper domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBP6_SPILD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ADB37925.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiro
sw_12_scaffold_369_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17418..17681
DNA (264bp) protein (88aa)
Family 31 glycosyl hydrolase, alpha-glucosidase {ECO:0000313|EMBL:CDM64169.1}; EC=3.2.1.177 {ECO:0000313|EMBL:CDM64169.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI00030D415A
sw_12_scaffold_369_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

17745..19409
DNA (1665bp) protein (555aa)
atsA; arylsulfatase AtsA (EC:3.1.6.1) Tax=GWF2_Lentisphaerae_50_93_curated
Arylsulfatase AtsA id=4476948 bin=GWF2_Lentisphaerae_50_93 species=Phaeobacter gallaeciensis genus=Phaeobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
arylsulfatase A family protein
sw_12_scaffold_369_15
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

19498..21045
DNA (1548bp) protein (516aa)
Cerebroside-sulfatase (EC:3.1.6.8) Tax=RBG_13_Planctomycetes_62_9_curated
Arylsulfatase A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB11_9PLAN
arylsulfatase A
sw_12_scaffold_369_16
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

21232..21885
DNA (654bp) protein (218aa)
ROK family member transcriptional repressor n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4APL8_MARSH
pmi; mannose-6-phosphate isomerase Tax=RBG_16_Chloroflexi_54_18_curated
ROK family member transcriptional repressor
sw_12_scaffold_369_17
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21891..24386
DNA (2496bp) protein (832aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V8Z3_BACUN
Alpha-1,2-mannosidase {ECO:0000313|EMBL:AHM63173.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgace
alpha-1,2-mannosidase
sw_12_scaffold_369_18
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24753..28172)
DNA (3420bp) protein (1140aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037254B5
Uncharacterized protein {ECO:0000313|EMBL:EZH75046.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
ASPIC/UnbV domain protein
sw_12_scaffold_369_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28384..28689)
DNA (306bp) protein (102aa)
ISSru3, transposase insB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5B9_SALRM
insB; transposase insB
Transposase insB {ECO:0000313|EMBL:CBH25773.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
Displaying 19 items

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