ggKbase home page

sw_12_scaffold_384

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_384_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..117
DNA (117bp) protein (39aa)
Threonine aldolase {ECO:0000313|EMBL:CBH24536.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CBH24536.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
sw_12_scaffold_384_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(133..744)
DNA (612bp) protein (204aa)
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CBH24535.1}; EC=1.4.3.5 {ECO:0000313|EMBL:CBH24535.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H930_SALRM
pdxH; pyridoxamine 5'-phosphate oxidase
sw_12_scaffold_384_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(838..1500)
DNA (663bp) protein (221aa)
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=2 Tax=Salinibacter ruber RepID=D5H929_SALRM
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:CBH24534.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
sw_12_scaffold_384_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1635..2105
DNA (471bp) protein (157aa)
50S ribosomal protein L21 n=2 Tax=Salinibacter ruber RepID=RL21_SALRD
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_12_scaffold_384_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2157..2417
DNA (261bp) protein (87aa)
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=24659369 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:CBH24532.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_12_scaffold_384_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2721..3962
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H926_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24531.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_384_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3955..4881)
DNA (927bp) protein (309aa)
hypothetical protein
hypothetical protein; K09933 hypothetical protein id=24659367 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_384_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5151..7226
DNA (2076bp) protein (692aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=24659366 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
peptidyl-prolyl cis-trans isomerase
sw_12_scaffold_384_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7275..8114)
DNA (840bp) protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H923_SALRM
dapF; diaminopimelate epimerase
sw_12_scaffold_384_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8248..9207
DNA (960bp) protein (320aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_12_scaffold_384_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9334..10188)
DNA (855bp) protein (285aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] id=24659363 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABC45405.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABC45405.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
3-hydroxybutyryl-CoA dehydrogenase
sw_12_scaffold_384_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10591..11406
DNA (816bp) protein (272aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein id=5026843 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Displaying 12 items

View Taxonomy