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sw_12_scaffold_880

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_880_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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641..1015
DNA (375bp) protein (125aa)
hypothetical protein
hypothetical protein id=24658813 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH26001.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_880_trna_1
unknown

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1218..1304
DNA (87bp)
transferRNA
sw_12_scaffold_880_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1314..2579
DNA (1266bp) protein (422aa)
Regulatory protein LytS {ECO:0000313|EMBL:CBH25994.1}; EC=2.7.3.- {ECO:0000313|EMBL:CBH25994.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Regulatory protein LytS n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD89_SALRM
lytS; Regulatory protein LytS
sw_12_scaffold_880_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2659..3351
DNA (693bp) protein (231aa)
Two-component system response regulator protein n=2 Tax=Salinibacter ruber RepID=Q2RYN6_SALRD
lytT; sensory transduction protein lytT
Sensory transduction protein lytT {ECO:0000313|EMBL:CBH25993.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_12_scaffold_880_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3417..3782
DNA (366bp) protein (122aa)
hypothetical protein
hypothetical protein id=24658804 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45149.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_880_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3915..4394
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD86_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25991.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_880_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4673..5743
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD85_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25990.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_880_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5953..7197
DNA (1245bp) protein (415aa)
ybjZ; ABC transporter ATP-binding protein
ybjZ; ABC transporter ATP-binding protein; K02004 putative ABC transport system permease protein id=24658801 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH25989.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_12_scaffold_880_8
unknown

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7251..7541
DNA (291bp) protein (97aa)

This feature has no annotations

sw_12_scaffold_880_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7538..8911
DNA (1374bp) protein (458aa)
salY; ABC transporter permease
salY; ABC transporter permease; K02004 putative ABC transport system permease protein id=24658800 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter permease protein {ECO:0000313|EMBL:CBH25988.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_12_scaffold_880_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8968..10485
DNA (1518bp) protein (506aa)
Outer membrane efflux protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYP1_SALRD
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABC44485.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_12_scaffold_880_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10537..11898
DNA (1362bp) protein (454aa)
membrane fusion efflux protein
membrane fusion efflux protein; K02005 HlyD family secretion protein id=24658798 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Membrane fusion efflux protein, putative {ECO:0000313|EMBL:ABC44985.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_12_scaffold_880_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12080..12790
DNA (711bp) protein (237aa)
ABC transporter ATP-binding protein n=2 Tax=Salinibacter ruber RepID=D5HD80_SALRM
ABC transporter ATP-binding protein
ATP-binding protein of ABC transporter {ECO:0000313|EMBL:ABC45784.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_12_scaffold_880_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12813..15326
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD79_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25984.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_880_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15473..15751)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L868_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29278.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
Displaying 15 items

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