ggKbase home page

sw_12_scaffold_935

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_935_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..422)
DNA (420bp) protein (140aa)
Fructosamine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H732_SALRM
Fructosamine kinase
Fructosamine kinase {ECO:0000313|EMBL:CBH23837.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_12_scaffold_935_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(500..1081)
DNA (582bp) protein (194aa)
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:ABC45689.1}; EC=3.1.3.48 {ECO:0000313|EMBL:ABC45689.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
Low molecular weight protein-tyrosine-phosphatase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4K4_SALRD
low molecular weight protein-tyrosine-phosphatase
sw_12_scaffold_935_3
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1272..2708)
DNA (1437bp) protein (479aa)
carbohydrate-binding protein SusD n=1 Tax=Salisaeta longa RepID=UPI0003B6C252
SusD/RagB family protein {ECO:0000313|EMBL:EID75884.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotoleran
hypothetical protein
sw_12_scaffold_935_4
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2756..5698)
DNA (2943bp) protein (981aa)
TonB-denpendent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B4F980
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AKD02043.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
sw_12_scaffold_935_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6060..7808
DNA (1749bp) protein (583aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H730_SALRM
xseA; exodeoxyribonuclease VII large subunit
sw_12_scaffold_935_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7817..8815
DNA (999bp) protein (333aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43795.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24657609 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_12_scaffold_935_7
RLO_PLX_64_10, Bacteria

Not on your lists

comp(8826..9302)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002E54708
PilT protein domain-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PilT protein domain protein
sw_12_scaffold_935_8
unknown

Not on your lists

comp(9306..9551)
DNA (246bp) protein (82aa)

This feature has no annotations

sw_12_scaffold_935_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9654..10427)
DNA (774bp) protein (258aa)
fabG; 3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=24657608 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CBH23833.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBH23833.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
short chain dehydrogenase/reductase family oxidoreductase
sw_12_scaffold_935_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10991..11659
DNA (669bp) protein (223aa)
ccmB; Heme exporter protein B
ccmB; Heme exporter protein B; K02194 heme exporter protein B id=24658131 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Heme exporter protein B {ECO:0000313|EMBL:CBH25334.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_935_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12371..12625
DNA (255bp) protein (85aa)
Heme exporter protein C n=2 Tax=Salinibacter ruber RepID=D5HBD1_SALRM
ccmC; Heme exporter protein C
Heme exporter protein C, putative {ECO:0000313|EMBL:ABC45121.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_12_scaffold_935_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12698..12979
DNA (282bp) protein (94aa)
hypothetical protein
hypothetical protein id=24658133 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25337.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_935_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13013..13444
DNA (432bp) protein (144aa)
Heme exporter protein E n=2 Tax=Salinibacter ruber RepID=D5HBD3_SALRM
ccmE; heme exporter protein E
Cytochrome c-type biogenesis protein CcmE, putative {ECO:0000313|EMBL:ABC45822.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
sw_12_scaffold_935_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13458..13922
DNA (465bp) protein (155aa)
hypothetical protein
hypothetical protein id=24658135 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25339.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_935_15
unknown

Not on your lists

14290..14514
DNA (225bp) protein (75aa)

This feature has no annotations

sw_12_scaffold_935_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(15438..16244)
DNA (807bp) protein (269aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=24658137 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
ksgA; dimethyladenosine transferase
sw_12_scaffold_935_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16335..17441)
DNA (1107bp) protein (369aa)
hypothetical protein
hypothetical protein id=24658138 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46152.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_935_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17609..18892)
DNA (1284bp) protein (428aa)
hypothetical protein
hypothetical protein id=24658139 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25343.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_935_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18889..19185)
DNA (297bp) protein (99aa)
ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=24658140 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddlA; D-alanine--D-alanine ligase
Displaying 19 items

View Taxonomy