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sw_12_scaffold_939

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_939_trna_1
unknown

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comp(308..380)
DNA (73bp)
transferRNA
sw_12_scaffold_939_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(427..948)
DNA (522bp) protein (174aa)
hypothetical protein
hypothetical protein id=24659795 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24966.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_939_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1012..2103)
DNA (1092bp) protein (364aa)
asd; aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] id=24659796 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ABC46049.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ABC46049.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
asd; aspartate-semialdehyde dehydrogenase
sw_12_scaffold_939_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2372..2722
DNA (351bp) protein (117aa)
FolD bifunctional protein; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=24659797 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
FolD bifunctional protein
sw_12_scaffold_939_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2694..3134
DNA (441bp) protein (147aa)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
Bifunctional protein FolD n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=FOLD_SALRD
FolD bifunctional protein
sw_12_scaffold_939_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3180..3455
DNA (276bp) protein (92aa)
transporter, small conductance mechanosensitive ion channel (MscS) family
small conductance mechanosensitive ion channel (MscS) family protein id=24659798 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transporter, small conductance mechanosensitive ion channel (MscS) family {ECO:0000313|EMBL:CBH24969.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_12_scaffold_939_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3452..4132
DNA (681bp) protein (227aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB4_SALRM
transporter, small conductance mechanosensitive ion channel (MscS) family
Transporter, small conductance mechanosensitive ion channel (MscS) family {ECO:0000313|EMBL:CBH24969.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_12_scaffold_939_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4154..4573)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24970.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_939_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4623..5447)
DNA (825bp) protein (275aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=761659 spec
5'-nucleotidase SurE n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB6_SALRM
surE; 5'-nucleotidase surE
sw_12_scaffold_939_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5581..6414)
DNA (834bp) protein (278aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB7_SALRM
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
sw_12_scaffold_939_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6564..7166)
DNA (603bp) protein (201aa)
Outer membrane protein (OmpH-like) n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1H5_SALRD
outer membrane lipoprotein
Outer membrane protein (OmpH-like) {ECO:0000313|EMBL:ABC44759.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_12_scaffold_939_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7240..7761)
DNA (522bp) protein (174aa)
ompH; Outer membrane chaperone Skp (OmpH)
outer membrane protein OmpH id=24659803 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:CBH24974.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_12_scaffold_939_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7901..10063)
DNA (2163bp) protein (721aa)
Surface antigen (D15): Surface antigen variable number n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC0_SALRM
Surface antigen (D15): Surface antigen variable number {ECO:0000313|EMBL:CBH24975.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
Surface antigen
sw_12_scaffold_939_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10600..11427)
DNA (828bp) protein (276aa)
uppS; undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=24659805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
uppS; undecaprenyl diphosphate synthase
sw_12_scaffold_939_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11908..12894)
DNA (987bp) protein (329aa)
Membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=24659806 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
Membrane-associated zinc metalloprotease
Displaying 15 items

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