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sw_12_scaffold_1642_11

Organism: SW_12_Salinibacter_ruber_64_60

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(7553..8167)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24659705 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 204.0
  • Bit_score: 294
  • Evalue 1.10e-76
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 203.0
  • Bit_score: 294
  • Evalue 3.20e-77
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:ABC44497.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 203.0
  • Bit_score: 294
  • Evalue 1.60e-76

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 615
GTGGACGTGGTGTCGCTCGGCAAGGACCGTCTGGCCGGGGAGGACGGTGCGGATCCGTTTCTTGGTCTCGTGCACCGGCTCGACCGGCCCGCGTCGGGCGTTATGGTGTTGGCTCGCACCTCGGACGCCGCTCGGGATCTCTCTCGGCAGTTTCGAGAGCGCCTCGTGGAGAAGCGCTATCTGGTCCTGGTGGAGGGGACCTTGAGCGGCATCGGCACCTGGACCGACTACATCGCTAAGCCGGATCGGCAGCCCCGCCTCGTCGATCCTGACCATTCTGAGGGGAAGCGGGCCGTACTGGAGTGGCAGGCCCTTACGAGTAGCGACGACCGCACGTTGCTTCAGGTCGAACTCCACACCGGCCGTCCCCACCAAATTCGTCTCCAGGCCACGAGCCGCGGGCATCCGGTGGTGGGAGATCAGCGATACGGGGCCACGTCGTCCATCGGGGACCGAGCAATCGCGCTCCACCACGCAGTCCTCCGGGTTGAGCACCCGGTGAGTCCCCGGCGCGAAACCTTTGGGGCCGAGCCCCCAGCGATCTGGGACGAAGCGACCACCGATGCCATGCGCGCGGCAGTGCGACGCGTTCTCGATCGGGCCCAGGCGTCCTGA
PROTEIN sequence
Length: 205
VDVVSLGKDRLAGEDGADPFLGLVHRLDRPASGVMVLARTSDAARDLSRQFRERLVEKRYLVLVEGTLSGIGTWTDYIAKPDRQPRLVDPDHSEGKRAVLEWQALTSSDDRTLLQVELHTGRPHQIRLQATSRGHPVVGDQRYGATSSIGDRAIALHHAVLRVEHPVSPRRETFGAEPPAIWDEATTDAMRAAVRRVLDRAQAS*