ggKbase home page

sw_12_scaffold_1642

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1642_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

1..159
DNA (159bp) protein (53aa)
MazF family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B4D823
PemK-like protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
sw_12_scaffold_1642_2
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

416..667
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B66272
Uncharacterized protein {ECO:0000313|EMBL:EKQ68029.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
hypothetical protein
sw_12_scaffold_1642_3
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

713..1030
DNA (318bp) protein (106aa)
DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B3D385
Nucleotide-binding protein PINc Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
sw_12_scaffold_1642_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1252..1536
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein id=24659699 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24871.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_1642_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1672..2943)
DNA (1272bp) protein (424aa)
multidrug resistance protein-like
multidrug resistance protein-like id=24659700 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Multidrug resistance protein-like {ECO:0000313|EMBL:CBH24872.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_12_scaffold_1642_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3020..4336)
DNA (1317bp) protein (439aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] id=24659701 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
hemL; glutamate-1-semialdehyde 2,1-aminomutase
sw_12_scaffold_1642_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4409..5014)
DNA (606bp) protein (202aa)
hypothetical protein
hypothetical protein id=24659702 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24874.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_1642_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5063..5692)
DNA (630bp) protein (210aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=2 Tax=Salinibacter ruber RepID=D5HA20_SALRM
hemH; ferrochelatase
sw_12_scaffold_1642_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5632..6330)
DNA (699bp) protein (233aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=2 Tax=Salinibacter ruber RepID=D5HA20_SALRM
hemH; ferrochelatase
sw_12_scaffold_1642_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6461..7444)
DNA (984bp) protein (328aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066, ECO:0000313|EMBL:CBH24876.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Coproporphyrinogen III oxidase, aerobic n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA21_SALRM
hemF; Coproporphyrinogen III oxidase, aerobic
sw_12_scaffold_1642_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7553..8167)
DNA (615bp) protein (205aa)
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24659705 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rluD; ribosomal large subunit pseudouridine synthase D
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:ABC44497.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
Displaying 11 items

View Taxonomy