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sw_12_scaffold_1177

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1177_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..599
DNA (597bp) protein (199aa)
SOUL heme-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXW3_9EURY
SOUL heme-binding protein {ECO:0000313|EMBL:EMA50436.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
SOUL heme-binding protein
sw_12_scaffold_1177_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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783..3263
DNA (2481bp) protein (827aa)
Putative cell surface protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6T6_9EURY
Putative cell surface protein {ECO:0000313|EMBL:EMA41108.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
FG-GAP repeat-containing protein, possibly sugar-related
sw_12_scaffold_1177_3
Pelodiscus sinensis, Pelodiscus, Testudines, Chordata, Metazoa

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comp(3623..4096)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Pelodiscus sinensis RepID=K7GCV5_PELSI
Uncharacterized protein {ECO:0000313|Ensembl:ENSPSIP00000018116}; TaxID=13735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Trionych
sw_12_scaffold_1177_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4306..4725
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_12_scaffold_1177_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4931..6097
DNA (1167bp) protein (389aa)
Alpha-1,4-glucan-protein synthase, UDP-forming n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYP2_9EURY
Alpha-1,4-glucan-protein synthase, UDP-forming {ECO:0000313|EMBL:EMA50433.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
Reversibly glycosylated polypeptide
sw_12_scaffold_1177_6
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6155..7447
DNA (1293bp) protein (431aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate iron-III) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4H050_HALVD
putative iron-III ABC transporter periplasmic substrate-binding protein
ABC-type transport system periplasmic substrate-binding protein (Probable substrate iron-III) {ECO:0000313|EMBL:ADE03643.1}; Putative iron-III ABC transporter periplasmic substrate-binding protein {EC
sw_12_scaffold_1177_7
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7449..9056
DNA (1608bp) protein (536aa)
ABC-type iron(III) transport system, permease protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R5J0_HALMT
sfuB; ABC-type iron(III) transport system, permease protein
ABC-type iron(III) transport system, permease protein {ECO:0000313|EMBL:AFK19500.1}; Iron ABC transporter permease {ECO:0000313|EMBL:AHZ21158.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobact
sw_12_scaffold_1177_8

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10293..12158
DNA (1866bp) protein (622aa)
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferases of PMT family n=1 Tax=uncultured archaeon A07HR60 RepID=V5ABD3_9ARCH
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferases of PMT family {ECO:0000313|EMBL:ESS13045.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A
hypothetical protein
sw_12_scaffold_1177_9
unknown

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12509..12754
DNA (246bp) protein (82aa)

This feature has no annotations

sw_12_scaffold_1177_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12914..13114
DNA (201bp) protein (67aa)
Transposase IS4 family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MT82_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA48528.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
ISH9-type transposase
Displaying 10 items

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