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sw_12_scaffold_3029

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_3029_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..462
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND93_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55836.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_3029_2
unknown

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comp(340..903)
DNA (564bp) protein (188aa)

This feature has no annotations

sw_12_scaffold_3029_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1005..1385
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45196.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_3029_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1382..1957
DNA (576bp) protein (192aa)
Isochorismatase hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE45_9EURY
Isochorismatase hydrolase {ECO:0000313|EMBL:EMA55833.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
isochorismatase hydrolase
sw_12_scaffold_3029_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2037..2753
DNA (717bp) protein (239aa)
glo; lyase/dioxygenase ( lactoylglutathione lyase, aromatic compounds dioxygenase) (EC:4.4.1.5)
Lactoylglutathione lyase-like lyase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIK6_9EURY
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EMA45198.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
sw_12_scaffold_3029_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3015..4064
DNA (1050bp) protein (350aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=1227456 species=
Carboxylate-amine ligase C450_00700 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND87_9EURY
carboxylate-amine ligase
sw_12_scaffold_3029_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4067..4690
DNA (624bp) protein (208aa)
Transcriptional regulator TrmB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHJ4_9EURY
Transcriptional regulator TrmB {ECO:0000313|EMBL:EMA45202.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
transcriptional regulator, TrmB
sw_12_scaffold_3029_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4841..5329
DNA (489bp) protein (163aa)
Phosphopantetheine adenylyltransferase {ECO:0000313|EMBL:EMA55829.1}; EC=2.7.7.3 {ECO:0000313|EMBL:EMA55829.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFF2_9EURY
sw_12_scaffold_3029_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5348..5656)
DNA (309bp) protein (103aa)
Transcription initiation factor TFB 4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE39_9EURY
Transcription initiation factor TFB 4 {ECO:0000313|EMBL:EMA55828.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
tfbA_4; transcription initiation factor TFB 4
sw_12_scaffold_3029_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5786..6010)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45205.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_12_scaffold_3029_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6128..6649
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45206.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_3029_trna_1
unknown

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6690..6774
DNA (85bp)
transferRNA
sw_12_scaffold_3029_12
unknown

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comp(7383..7589)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_12_scaffold_3029_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7804..8829
DNA (1026bp) protein (342aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKW8_HALBP
type i restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ADQ67120.1}; Type i restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ELY29668.1}; TaxID=46
Displaying 14 items

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