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sw_12_scaffold_1021_4

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(2211..2552)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt5 n=2 Tax=Halobacterium salinarum RepID=B0R381_HALS3 similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 145.0
  • Bit_score: 176
  • Evalue 1.50e-41
nusG; transcription antitermination protein NusG similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 145.0
  • Bit_score: 176
  • Evalue 4.10e-42
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950, ECO:0000313|EMBL:CAP13193.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 145.0
  • Bit_score: 176
  • Evalue 2.10e-41

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Taxonomy

Halobacterium salinarum → Halobacterium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 342
ATGAGCGTGTACGCCGTGAAGACGACCGCGAGCCAGGAGCGTACGGTGGCGGACATGATCATGAACCGCGAGGCCGAGGACATCCACGCCGCGCTCGCGCCCGACTCGTCCTCGATCGCGGAGGTCGAACACTTCCTCTCGCCGAAACCCGACGTCGAGGGGATCGCCGAAAGCGACATCGTCGAACTCATCGCCGGCCCGTTCAAGGGCGAGAAGGCCCAGGTCCAGCGGATCGACGAGGGCAAGGACCAGGTGACCGTCGAACTCTACGAGGCGACGGTGCCGATCCCCGTCACGGTTCGTGGCGACCAGATCCGGGTGCTCGACTCCGAAGAGCGATAG
PROTEIN sequence
Length: 114
MSVYAVKTTASQERTVADMIMNREAEDIHAALAPDSSSIAEVEHFLSPKPDVEGIAESDIVELIAGPFKGEKAQVQRIDEGKDQVTVELYEATVPIPVTVRGDQIRVLDSEER*