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sw_12_scaffold_1021

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1021_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..239)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHV5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44923.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_1021_2
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(409..1002)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IME9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ97981.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
sw_12_scaffold_1021_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1188..1904
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7R1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53159.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_12_scaffold_1021_4
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2211..2552)
DNA (342bp) protein (114aa)
Transcription elongation factor Spt5 n=2 Tax=Halobacterium salinarum RepID=B0R381_HALS3
nusG; transcription antitermination protein NusG
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950, ECO:0000313|EMBL:CAP13193.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
sw_12_scaffold_1021_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2554..2727)
DNA (174bp) protein (58aa)
Protein translocase subunit SecE n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5G3_9EURY
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1227456 species="Archaea; Euryarchaeo
secE; preprotein translocase subunit SecE
sw_12_scaffold_1021_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2930..4360
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MII7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45502.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
cnm; collagen-binding protein
sw_12_scaffold_1021_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4638..5759)
DNA (1122bp) protein (374aa)
Cell division protein FtsZ n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT3_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
ftsZ3; cell division protein FtsZ
sw_12_scaffold_1021_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5788..7173)
DNA (1386bp) protein (462aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227455 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR9_9EURY
hypothetical protein
sw_12_scaffold_1021_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7173..8537)
DNA (1365bp) protein (455aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1X7_9EURY
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EMA51498.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sodium/calcium exchanger membrane region
sw_12_scaffold_1021_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8672..9124
DNA (453bp) protein (151aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=797210 species="Archaea; Euryar
Shikimate dehydrogenase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3S1_HALXS
Shikimate dehydrogenase
sw_12_scaffold_1021_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9142..9378
DNA (237bp) protein (79aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1227455 species="Archaea; Eurya
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM2_9EURY
sw_12_scaffold_1021_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9403..10197
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44930.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_1021_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10265..11140
DNA (876bp) protein (292aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9F6_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
sw_12_scaffold_1021_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11170..11586
DNA (417bp) protein (139aa)
Oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N840_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA53743.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
2Fe-2S ferredoxin
sw_12_scaffold_1021_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11631..11927)
DNA (297bp) protein (99aa)
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGU4_9EURY
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:EMA44936.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
hypothetical protein
sw_12_scaffold_1021_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12000..12725)
DNA (726bp) protein (242aa)
Alanyl-tRNA synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N031_9EURY
Alanyl-tRNA synthetase {ECO:0000313|EMBL:EMA50444.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
threonyl/alanyl tRNA synthetase, SAD
sw_12_scaffold_1021_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12791..13063)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50443.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_1021_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13215..13388)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49606.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_12_scaffold_1021_19
unknown

Not on your lists

13447..13605
DNA (159bp) protein (53aa)

This feature has no annotations

sw_12_scaffold_1021_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13598..14191
DNA (594bp) protein (198aa)
Ferritin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW4_9EURY
Ferritin {ECO:0000313|EMBL:EMA45384.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
Ferritin Dps family protein
Displaying 20 items

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