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sw_12_scaffold_1843_2

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(259..654)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_ similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 128.0
  • Bit_score: 162
  • Evalue 4.60e-37
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6E3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 130.0
  • Bit_score: 163
  • Evalue 2.00e-37
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 131.0
  • Bit_score: 146
  • Evalue 4.10e-33

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Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 396
GTGAAGGTTCTCGACGCCTCGTTTCTGATCGACTACGAGCACGGAGTCGAAGCGGCCAAGGAGTATCTGCTCGACCACGCCGACGAGGAGTTCGTCGTCCCTGCGCCCGTTCACACCGAGTATCTGCTCGGGGAGGTCCACGCCGACGGCGGGACCGATCTACCCGCTGCACGCGCCGAACTCGCGTGGGCAACCATCCGTCCCGCGACCGAGCGAACGTCGAATCTCGCGAGCGAGGTCGCCGACGAAATCGACCCACAGGGACCCCGACTGACCGCCGTCGACGCGCTCGTCGCCGGAACCGGCCGCGAGGTCGGCGCGCCGGTGGTCGCCGGCGACGGCGACCTCACCCATCCCGAAACGAAGGTCGTCCTCGATGTCGAGGAGTATCGCTGA
PROTEIN sequence
Length: 132
VKVLDASFLIDYEHGVEAAKEYLLDHADEEFVVPAPVHTEYLLGEVHADGGTDLPAARAELAWATIRPATERTSNLASEVADEIDPQGPRLTAVDALVAGTGREVGAPVVAGDGDLTHPETKVVLDVEEYR*