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sw_12_scaffold_1843

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1843_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..158)
DNA (156bp) protein (52aa)
Tryptophanase/L-cysteine desulfhydrase, PLP-dependent {ECO:0000313|EMBL:EMA50973.1}; EC=4.1.99.1 {ECO:0000313|EMBL:EMA50973.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Tryptophanase/L-cysteine desulfhydrase, PLP-dependent n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N097_9EURY
tryptophanase
sw_12_scaffold_1843_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(259..654)
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6E3_9EURY
PilT protein domain-containing protein
sw_12_scaffold_1843_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(651..902)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N559_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52264.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_12_scaffold_1843_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1086..1856)
DNA (771bp) protein (257aa)
Putative methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPZ7_9EURY
Putative methyltransferase {ECO:0000313|EMBL:EMA46814.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
methylase
sw_12_scaffold_1843_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1912..3720)
DNA (1809bp) protein (603aa)
ATPase RIL n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN58_9EURY
ATPase RIL {ECO:0000313|EMBL:EMA46813.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
ABC transporter
sw_12_scaffold_1843_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3720..4022)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM88_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46812.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_1843_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4149..4421
DNA (273bp) protein (91aa)
Transcription regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NG01_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA55610.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
transcription regulator
sw_12_scaffold_1843_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4532..4759)
DNA (228bp) protein (76aa)
Putative mechanosensitive ion channel n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCP7_9EURY
Putative mechanosensitive ion channel {ECO:0000313|EMBL:EMA55611.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
mechanosensitive ion channel MscS
sw_12_scaffold_1843_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4750..5469)
DNA (720bp) protein (240aa)
Putative mechanosensitive ion channel n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQQ3_9EURY
Putative mechanosensitive ion channel {ECO:0000313|EMBL:EMA46810.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
mechanosensitive ion channel protein MscS
sw_12_scaffold_1843_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5469..5720)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCC8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55612.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_1843_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5752..6027)
DNA (276bp) protein (92aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
RNase P subunit RPR2 (EC:3.1.26.5)
Ribonuclease P protein component 4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN53_9EURY
sw_12_scaffold_1843_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6477..7148
DNA (672bp) protein (224aa)
Putative sugar transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMA3_9EURY
Putative sugar transferase {ECO:0000313|EMBL:EMA46806.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
gtr-4; sugar transferase
sw_12_scaffold_1843_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7173..8354
DNA (1182bp) protein (394aa)
Glycosyltransferase, type 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCQ0_9EURY
Glycosyltransferase, type 1 {ECO:0000313|EMBL:EMA55616.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
gth1; glycosyltransferase, type 1
sw_12_scaffold_1843_14

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comp(8212..8613)
DNA (402bp) protein (134aa)
Putative dioxygenase of extradiol dioxygenase family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XE44_9ARCH
Putative dioxygenase of extradiol dioxygenase family {ECO:0000313|EMBL:ESS06264.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
glyoxalase/bleomycin resistance protein/dioxygenase
Displaying 14 items

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