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sw_12_scaffold_3574_6

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: comp(2627..3373)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 248.0
  • Bit_score: 459
  • Evalue 2.70e-126
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 248.0
  • Bit_score: 461
  • Evalue 6.50e-127
DNA-directed RNA polymerase, alpha subunit/40 kD subunit similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 249.0
  • Bit_score: 378
  • Evalue 1.20e-102

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 747
GTGAGCGCCGCGTACGACGTCGCGTTCATCGACCGCGACGACCGCGACGCTCGCTTCCTCGTCAGAGGGATCACGCCGGCGTTCGCCAACGGCATCCGGCGGGCGATGGTGGCCGACGTTCCCACCCTGTCGATCGACACCGTGCGCGTGGTCGAGAACTCGTCGGTGATGTTCGACGAGCAGATCGGCCACCGGCTCGGGATGGTGCCCCTTTCCGCGCCGCCGAACGAGTTCGAATCGGGCGAGGGCGTCACGCTGGCCCTCGACGTTTCGGGCCCCGACACCGCGTACTCGGGCGACCTCGTCAGCAGCGATGCGGTGGTCGAACCCGCCGAGGACAACGTCCCGATCATCGAACTCAAGGAGGGCCAGCGCCTCGAAGTCGAGGCCGAGGCCGTGCTCGACACGGGGAAGTCCCACGCCAAACACCAGGGCGGCGTGGCGGTCGGCTACCGCCATCTCCAGCGGGTGGAGGTCGTCGGCGACCGCGAGGAGTTCGCCGACGAGGAGCCCACCATCCTGCGGGGGGTTATCGAAGACGACGGCGAGCTCGTCCCCGCGGAGGAGTTCGATCACGACCTCACGAACCGGTATCCGGGCAAGGAGGTCACGGTCGAGGACGTGCCGAACGCGTTCGTCTTCCACGTCGAGACCGACGGCTCGCTGACCGTCGAGGAGCTGGTGACGGCGGCGGTCGACTCGCTGGAAGCACGCGCGAACGAACTCAAGGAAGCAGTTCAACTGTAA
PROTEIN sequence
Length: 249
VSAAYDVAFIDRDDRDARFLVRGITPAFANGIRRAMVADVPTLSIDTVRVVENSSVMFDEQIGHRLGMVPLSAPPNEFESGEGVTLALDVSGPDTAYSGDLVSSDAVVEPAEDNVPIIELKEGQRLEVEAEAVLDTGKSHAKHQGGVAVGYRHLQRVEVVGDREEFADEEPTILRGVIEDDGELVPAEEFDHDLTNRYPGKEVTVEDVPNAFVFHVETDGSLTVEELVTAAVDSLEARANELKEAVQL*