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sw_12_scaffold_3574

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_3574_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..864)
DNA (864bp) protein (288aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRT4_9EURY
sw_12_scaffold_3574_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(861..1046)
DNA (186bp) protein (62aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit K n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ25_9EURY
DNA-directed RNA polymerase, subunit K/omega
sw_12_scaffold_3574_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1187..1582)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3X2_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
archaeal ribosomal protein S9P
sw_12_scaffold_3574_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1604..1993)
DNA (390bp) protein (130aa)
50S ribosomal protein L13 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q4_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
rpl13p; 50S ribosomal protein L13P
sw_12_scaffold_3574_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1990..2340)
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L18
sw_12_scaffold_3574_trna_2
unknown

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comp(2356..2440)
DNA (85bp)
transferRNA
sw_12_scaffold_3574_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2627..3373)
DNA (747bp) protein (249aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY
DNA-directed RNA polymerase, alpha subunit/40 kD subunit
sw_12_scaffold_3574_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3377..3640)
DNA (264bp) protein (88aa)
30S ribosomal protein S11 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7C4_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
30S ribosomal protein S14e (S11p)
sw_12_scaffold_3574_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3637..4215)
DNA (579bp) protein (193aa)
30S ribosomal protein S4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP59_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps4p; 30S ribosomal protein S4P
sw_12_scaffold_3574_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4216..4731)
DNA (516bp) protein (172aa)
30S ribosomal protein S13 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q7_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
30S ribosomal protein S18e (S13p)
sw_12_scaffold_3574_trna_1
unknown

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comp(4749..4833)
DNA (85bp)
transferRNA
sw_12_scaffold_3574_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5017..6081
DNA (1065bp) protein (355aa)
ATP-binding protein Mrp 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V3_9EURY
ATP-binding protein Mrp 1 {ECO:0000313|EMBL:EMA52558.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
plasmid partitioning ATPase-like protein
sw_12_scaffold_3574_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6151..6498)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50193.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_3574_12
unknown

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comp(6653..7084)
DNA (432bp) protein (144aa)

This feature has no annotations

sw_12_scaffold_3574_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7504..8058
DNA (555bp) protein (185aa)
Aldehyde Dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MRX1_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA48477.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
Aldehyde Dehydrogenase
sw_12_scaffold_3574_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8066..11971
DNA (3906bp) protein (1302aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E7_9EURY
Phosphoenolpyruvate carboxylase {ECO:0000313|EMBL:EMA52585.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
sw_12_scaffold_3574_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12183..12296
DNA (114bp) protein (38aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
Tyrosyl-tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSG3_9EURY
Displaying 17 items

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