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sw_12_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 140 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_0_1
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1208)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7S6_HALMT
hypothetical protein
Amidohydrolase {ECO:0000313|EMBL:AHZ23655.1}; Uncharacterized protein {ECO:0000313|EMBL:AFK20286.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofera
sw_12_scaffold_0_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1318..2613
DNA (1296bp) protein (432aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.34 {ECO:0000256|RuleBase:RU361219};; TaxID=797209 sp
3-hydroxy-3-methylglutaryl-CoA reductase (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZX0_9EURY
sw_12_scaffold_0_3
unknown

Not on your lists

comp(2679..3161)
DNA (483bp) protein (161aa)

This feature has no annotations

sw_12_scaffold_0_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3368..4459)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A3U0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60078.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_0_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4615..6549)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEI2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58384.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_0_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6784..6975
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH81_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45061.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_12_scaffold_0_7
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7120..7344
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R445_HALS3
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAP13510.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strai
sw_12_scaffold_0_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7442..7885
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRS5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36282.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
polyketide cyclase/dehydrase
sw_12_scaffold_0_9
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8094..8432)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B9C0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ06259.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_12_scaffold_0_10

Not on your lists

8624..8914
DNA (291bp) protein (97aa)
Amidohydrolase n=1 Tax=halophilic archaeon DL31 RepID=G2MJI9_9ARCH
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEN04890.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_0_11

Not on your lists

8911..10410
DNA (1500bp) protein (500aa)
beta-Ala-His dipeptidase (EC:3.4.13.20)
Beta-Ala-His dipeptidase {ECO:0000313|EMBL:AEN04942.1}; EC=3.4.13.20 {ECO:0000313|EMBL:AEN04942.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Beta-Ala-His dipeptidase n=1 Tax=halophilic archaeon DL31 RepID=G2MKJ4_9ARCH
sw_12_scaffold_0_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10752..11222
DNA (471bp) protein (157aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CL97_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ELZ22659.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
glyoxalase/bleomycin resistance protein/dioxygenase
sw_12_scaffold_0_13
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11462..11797
DNA (336bp) protein (112aa)
HTH DNA binding domain protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZLY0_9EURY
HTH DNA binding domain protein {ECO:0000313|EMBL:ELY87041.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 128
DNA binding protein
sw_12_scaffold_0_14
unknown

Not on your lists

11746..11859
DNA (114bp) protein (38aa)

This feature has no annotations

sw_12_scaffold_0_15
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12309..13922
DNA (1614bp) protein (538aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B7F9_9EURY
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
sw_12_scaffold_0_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13988..14767)
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halogranum salarium B-1 RepID=J3JFF0_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJN59199.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
short-chain dehydrogenase/reductase SDR
sw_12_scaffold_0_17
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14774..15808)
DNA (1035bp) protein (345aa)
qor2; Zn-dependent oxidoreductase/NADPH2:quinone reductase (EC:1.6.5.5)
Zn-dependent oxidoreductase/NADPH2:quinone reductase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAL4_9EURY
Zn-dependent oxidoreductase/NADPH2:quinone reductase {ECO:0000313|EMBL:EMA18256.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source
sw_12_scaffold_0_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16002..17072
DNA (1071bp) protein (357aa)
Alcohol dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LY63_9EURY
Alcohol dehydrogenase {ECO:0000313|EMBL:EMA38108.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6
zinc-binding dehydrogenase
sw_12_scaffold_0_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17478..18776)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MYS9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49550.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
putative permease
sw_12_scaffold_0_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19075..19782
DNA (708bp) protein (236aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halogranum salarium B-1 RepID=J3JE40_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EJN58029.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source
binding-protein-dependent transport systems inner membrane component
sw_12_scaffold_0_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19775..20659
DNA (885bp) protein (295aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halogranum salarium B-1 RepID=J2ZBJ1_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EJN58030.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source
binding-protein-dependent transport systems inner membrane component
sw_12_scaffold_0_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20659..21885
DNA (1227bp) protein (409aa)
ABC transporter-like protein n=1 Tax=Halogranum salarium B-1 RepID=J3JE39_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:EJN58031.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
sw_12_scaffold_0_23
unknown

Not on your lists

21885..22112
DNA (228bp) protein (76aa)

This feature has no annotations

sw_12_scaffold_0_24
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22109..24280
DNA (2172bp) protein (724aa)
Beta-D-galactosidase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JQH3_9EURY
Beta-D-galactosidase {ECO:0000313|EMBL:EMA11246.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 338
beta-galactosidase
sw_12_scaffold_0_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24421..25962)
DNA (1542bp) protein (514aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP
Glycerol kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUM9_9EURY
glycerol kinase
sw_12_scaffold_0_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26200..27999)
DNA (1800bp) protein (600aa)
archaeosine tRNA-ribosyltransferase type 2 (EC:2.4.2.-)
tRNA-guanine transglycosylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBU9_9EURY
tRNA-guanine transglycosylase {ECO:0000313|EMBL:EMA55447.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
sw_12_scaffold_0_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27996..29588)
DNA (1593bp) protein (531aa)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tgtA1; queuine/archaeosine tRNA-ribosyltransferase (EC:2.4.2.29)
tRNA-guanine(15) transglycosylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMU9_9EURY
sw_12_scaffold_0_28
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29806..30276
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8C5_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16171.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_0_29
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30476..31111)
DNA (636bp) protein (212aa)
NUDIX hydrolase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0A5D7_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:ELY93531.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990.;"
NUDIX hydrolase
sw_12_scaffold_0_30
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31526..31987
DNA (462bp) protein (154aa)
glpQ1; glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGD3_HALAR
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EMA19224.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
Displaying items 1-30 of 140 in total

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