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sw_12_scaffold_104

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_104_1

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comp(3..794)
DNA (792bp) protein (264aa)
Putative acyl-CoA transferases/carnitine dehydratase n=2 Tax=Archaea RepID=U1P154_9EURY
Putative acyl-CoA transferases/carnitine dehydratase {ECO:0000313|EMBL:ESS11149.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
CoA transferase
sw_12_scaffold_104_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(951..1580)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2T8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50990.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_104_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1719..2783)
DNA (1065bp) protein (355aa)
Polyprenyl synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYX1_9EURY
Polyprenyl synthetase {ECO:0000313|EMBL:EMA50811.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
polyprenyl synthetase
sw_12_scaffold_104_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2999..4087)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFJ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59271.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_104_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4420..5046
DNA (627bp) protein (209aa)
Halocyanin hcpC n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSM7_HALMO
Halocyanin hcpC {ECO:0000313|EMBL:EMA47460.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
hcpC; halocyanin hcpC
sw_12_scaffold_104_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5102..6778
DNA (1677bp) protein (559aa)
sulfite oxidase (EC:1.8.3.1)
Sulfite oxidase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRU8_HALMO
Sulfite oxidase {ECO:0000313|EMBL:EMA47459.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
sw_12_scaffold_104_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6794..7339)
DNA (546bp) protein (182aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQ38_HALMO
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus mor
FKBP-type peptidylprolyl isomerase
sw_12_scaffold_104_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7446..8783
DNA (1338bp) protein (446aa)
Peptidase M28 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSV1_9EURY
Peptidase M28 {ECO:0000313|EMBL:EFW92510.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
iap; aminopeptidase
sw_12_scaffold_104_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8942..9379
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DGL6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ05162.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_12_scaffold_104_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9684..9962)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46172.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_104_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9955..10377)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W3L7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00607.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_12_scaffold_104_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10477..11274)
DNA (798bp) protein (266aa)
petD; menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b/c subunit (EC:1.10.2.-)
Cytochrome b(C-terminal)/b6 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNZ6_9EURY
Cytochrome b(C-terminal)/b6 {ECO:0000313|EMBL:EMA46170.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
sw_12_scaffold_104_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11425..12237)
DNA (813bp) protein (271aa)
Cytochrome bc1 complex cytochrome b subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYI6_9EURY
Cytochrome bc1 complex cytochrome b subunit {ECO:0000313|EMBL:EMA50787.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
cytochrome b/b6 protein
sw_12_scaffold_104_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12244..13113)
DNA (870bp) protein (290aa)
Cytochrome bc1 complex Rieske iron-sulfur protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MX44_9EURY
Cytochrome bc1 complex Rieske iron-sulfur protein {ECO:0000313|EMBL:EMA50156.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
menaquinol--cytochrome-c reductase
sw_12_scaffold_104_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13163..13549)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N246_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50785.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_104_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13549..14130)
DNA (582bp) protein (194aa)
Blue (Type 1) copper domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M6T3_HALMO
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:EMA40334.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
blue (type 1) copper domain-containing protein
sw_12_scaffold_104_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14329..15393)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50153.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_104_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15535..16035
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYI1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50782.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_104_19
unknown

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16357..17085
DNA (729bp) protein (243aa)

This feature has no annotations

sw_12_scaffold_104_20

Not on your lists

17179..17946
DNA (768bp) protein (256aa)
Uncharacterized protein n=3 Tax=Archaea RepID=B9LVG6_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07688.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_104_21
unknown

Not on your lists

comp(18118..18396)
DNA (279bp) protein (93aa)

This feature has no annotations

sw_12_scaffold_104_trna_1
unknown

Not on your lists

comp(18579..18681)
DNA (103bp)
transferRNA
sw_12_scaffold_104_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18835..19275)
DNA (441bp) protein (147aa)
DtxR family iron (Metal) dependent repressor n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1Y7_9EURY
DtxR family iron (Metal) dependent repressor {ECO:0000313|EMBL:EMA50720.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
iron dependent repressor
sw_12_scaffold_104_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19322..19798)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P115_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49030.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_104_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19916..20221)
DNA (306bp) protein (102aa)
SufBD protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYB9_9EURY
SufBD protein {ECO:0000313|EMBL:EMA50722.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
FeS assembly protein SufD
sw_12_scaffold_104_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20211..21122)
DNA (912bp) protein (304aa)
SufBD protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYB9_9EURY
SufBD protein {ECO:0000313|EMBL:EMA50722.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Iron-regulated ABC transporter permease protein SufD
sw_12_scaffold_104_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21232..22665)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJF4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45837.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sufB_3; Fe-S cluster assembly protein ABC transporter permease
sw_12_scaffold_104_27
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22807..23727)
DNA (921bp) protein (307aa)
FeS assembly ATPase SufC n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BT33_9EURY
FeS assembly ATPase SufC {ECO:0000313|EMBL:ELZ13277.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 1389
yurF; ABC transporter ATP-binding protein
sw_12_scaffold_104_28
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23917..26664)
DNA (2748bp) protein (916aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
DNA polymerase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1Q9_9EURY
DNA polymerase elongation subunit (family b)
sw_12_scaffold_104_29
unknown

Not on your lists

26813..27172
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying items 1-30 of 50 in total

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