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sw_12_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_107_trna_2
unknown

Not on your lists

comp(146..230)
DNA (85bp)
transferRNA
sw_12_scaffold_107_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(305..1993)
DNA (1689bp) protein (563aa)
Probable cobyric acid synthase n=2 Tax=Halobiforma lacisalsi RepID=M0LC90_9EURY
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi
Cobyric acid synthase
sw_12_scaffold_107_2
unknown

Not on your lists

2161..3420
DNA (1260bp) protein (420aa)

This feature has no annotations

sw_12_scaffold_107_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4047..4802)
DNA (756bp) protein (252aa)
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6P9_HALXS
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP {ECO:0000313|EMBL:AEH37791.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger
sw_12_scaffold_107_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4850..5725)
DNA (876bp) protein (292aa)
Adenosylcobinamide amidohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N998_9EURY
Adenosylcobinamide amidohydrolase {ECO:0000313|EMBL:EMA53230.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
hypothetical protein
sw_12_scaffold_107_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5718..6761)
DNA (1044bp) protein (348aa)
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9C1_HALXS
L-threonine-O-3-phosphate decarboxylase
L-threonine-O-3-phosphate decarboxylase {ECO:0000313|EMBL:AEH36857.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduens
sw_12_scaffold_107_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6850..7656)
DNA (807bp) protein (269aa)
GTP:adenosylcobinamide-phosphateguanylyltransfer ase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6P3_9EURY
GTP:adenosylcobinamide-phosphateguanylyltransfer ase {ECO:0000313|EMBL:EMA53228.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
GTP:adenosylcobinamide-phosphate guanylyltransferase
sw_12_scaffold_107_7
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7656..8435)
DNA (780bp) protein (260aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phospha
cobS; cobalamin 5-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ICA3_9EURY
sw_12_scaffold_107_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8432..9616)
DNA (1185bp) protein (395aa)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Halobacterium sp. DL1 RepID=G4IIE1_9EURY
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
cobalamin biosynthesis protein CobD
sw_12_scaffold_107_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9598..10341)
DNA (744bp) protein (248aa)
HAD superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D8V5_9EURY
HAD superfamily hydrolase {ECO:0000313|EMBL:ELZ30574.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_12_scaffold_107_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10543..10776
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTD3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67211.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_12_scaffold_107_11
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10776..11708
DNA (933bp) protein (311aa)
hypothetical protein id=24621917 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH00317.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_12_scaffold_107_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11849..12388
DNA (540bp) protein (180aa)
Homolog to restriction system mrr n=2 Tax=Haloquadratum walsbyi RepID=Q18DE5_HALWD
mrr; restriction system mrr-like protein
Homolog to restriction system mrr {ECO:0000313|EMBL:CAJ51122.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsb
sw_12_scaffold_107_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12405..13601)
DNA (1197bp) protein (399aa)
xaa-pro aminopeptidase id=24615945 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Xaa-pro aminopeptidase {ECO:0000313|EMBL:ESP88149.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
xaa-pro aminopeptidase
sw_12_scaffold_107_14
unknown

Not on your lists

13657..14106
DNA (450bp) protein (150aa)

This feature has no annotations

sw_12_scaffold_107_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14263..14724)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0I7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51043.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_107_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14861..15850)
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWE3_HALMD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACV46284.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
sw_12_scaffold_107_trna_1
unknown

Not on your lists

comp(16025..16098)
DNA (74bp)
transferRNA
sw_12_scaffold_107_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16246..16911
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49863.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_107_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17137..17343
DNA (207bp) protein (69aa)
Putative transcriptional regulator, CopG family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMD4_HALUD
transcriptional regulator, CopG family
Putative transcriptional regulator, CopG family {ECO:0000313|EMBL:ACV12573.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
sw_12_scaffold_107_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17347..18537
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG5_HALMD
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
sw_12_scaffold_107_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18756..19763)
DNA (1008bp) protein (336aa)
N-type ATP pyrophosphatase superfamily protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7X2_9EURY
N-type ATP pyrophosphatase superfamily protein {ECO:0000313|EMBL:EMA54017.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
PP-loop domain protein
sw_12_scaffold_107_21
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20033..22129)
DNA (2097bp) protein (699aa)
Glycoside hydrolase 15-like protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AI34_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:ELY98234.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoens
glycoside hydrolase 15-like protein
sw_12_scaffold_107_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22349..24346)
DNA (1998bp) protein (666aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBD2_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA53970.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
glycosyl hydrolase, glucoamylase
sw_12_scaffold_107_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24722..25384
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49867.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_107_24
Marinobacter similis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25525..25797
DNA (273bp) protein (91aa)
Uncharacterized gene 73 protein n=1 Tax=Alcelaphine herpesvirus 1 (strain C500) RepID=VG73_ALHV1
Uncharacterized protein {ECO:0000313|EMBL:AHI30303.1}; TaxID=1420916 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sim
hypothetical protein
sw_12_scaffold_107_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25811..26668)
DNA (858bp) protein (286aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBW2_9EURY
DNA-(apurinic or apyrimidinic site) lyase
sw_12_scaffold_107_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26974..27510
DNA (537bp) protein (179aa)
Peroxiredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D512_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ELZ29938.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;
peroxiredoxin
sw_12_scaffold_107_27
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27507..28166
DNA (660bp) protein (220aa)
Peroxiredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3A5Y4_9EURY
Peroxiredoxin {ECO:0000313|EMBL:EJN60893.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peroxiredoxin
sw_12_scaffold_107_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28257..29075)
DNA (819bp) protein (273aa)
lplA; lipoate-protein ligase (EC:2.7.7.63)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZL8_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA49870.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
Displaying items 1-30 of 56 in total

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