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sw_12_scaffold_121

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_121_1
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..533
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ68898.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
sw_12_scaffold_121_2
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

693..1061
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=M0A037_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY92115.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_12_scaffold_121_3
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1054..1818
DNA (765bp) protein (255aa)
Putative copper binding protein n=2 Tax=Haloarcula RepID=Q5V701_HALMA
putative copper binding protein
Putative copper binding protein {ECO:0000313|EMBL:EMA27624.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
sw_12_scaffold_121_trna_2
unknown

Not on your lists

comp(2007..2078)
DNA (72bp)
transferRNA
sw_12_scaffold_121_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2181..2852)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9S3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16412.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_121_5
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3342..3650)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=4 Tax=Haloquadratum walsbyi RepID=RS10_HALWD
rps10p; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" s
sw_12_scaffold_121_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3651..4916)
DNA (1266bp) protein (422aa)
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5R7_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_12_scaffold_121_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5096..6145)
DNA (1050bp) protein (350aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=24616505 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:ESP87588.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
sw_12_scaffold_121_8
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6142..6684)
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UZT0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15117.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_12_scaffold_121_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7330..7665
DNA (336bp) protein (112aa)
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=14430160 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase Tax=CSP1_5_NC10
dioxygenase, ferredoxin subunit
sw_12_scaffold_121_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7818..8999
DNA (1182bp) protein (394aa)
Nucleotidyl transferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8N9_9EURY
Nucleotidyl transferase {ECO:0000313|EMBL:EMA53943.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
glucose-1-phosphate thymidylyltransferase
sw_12_scaffold_121_11
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9099..9377
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0D5H0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30741.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_12_scaffold_121_12
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9496..10341)
DNA (846bp) protein (282aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Halonotius sp. J07HN4 RepID=U1QGY2_9EURY
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:ERH06103.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
cbiO; ABC-type transport system ATP-binding protein (probable substrate cobalt/nickel/biotin)
sw_12_scaffold_121_13
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10338..11138)
DNA (801bp) protein (267aa)
cbiQ5; cobalt ABC transporter permease; K02008 cobalt/nickel transport system permease protein id=24622025 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:ERH00429.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotiu
cbiQ2; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
sw_12_scaffold_121_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11386..12072)
DNA (687bp) protein (229aa)
ABC-type transport system permease protein (Probable substrate cobalt/nickel/biotin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRF8_NATM8
cbiM; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
ABC-type transport system permease protein (Probable substrate cobalt/nickel/biotin) {ECO:0000313|EMBL:CCQ36794.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
sw_12_scaffold_121_15
unknown

Not on your lists

comp(12130..12384)
DNA (255bp) protein (85aa)

This feature has no annotations

sw_12_scaffold_121_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12666..13097
DNA (432bp) protein (144aa)
Putative nickel-responsive regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSS3_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
transcriptional regulator
sw_12_scaffold_121_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13161..14366)
DNA (1206bp) protein (402aa)
Phosphate transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3M8_9EURY
Phosphate transporter {ECO:0000313|EMBL:EMA52476.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
phosphate/sulfate permease
sw_12_scaffold_121_18
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14686..15126
DNA (441bp) protein (147aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=1085029 species="Archaea; Eu
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=halophilic archaeon J07HB67 RepID=U1R3S9_9EURY
sw_12_scaffold_121_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15129..16283
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44493.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_121_20
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16540..17910)
DNA (1371bp) protein (457aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000313|EMBL:AEH35846.1}; EC=5.4.2.10 {ECO:0000313|EMBL:AEH35846.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.
Phosphoglucosamine mutase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6U9_HALXS
sw_12_scaffold_121_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18087..18923
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43856.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_121_22
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19370..20242
DNA (873bp) protein (291aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MDT4_HALMO
ribose-phosphate pyrophosphokinase
sw_12_scaffold_121_23
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20364..23729)
DNA (3366bp) protein (1122aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1495067 species="Archaea; E
Isoleucine--tRNA ligase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5G2_9EURY
isoleucyl-tRNA synthetase
sw_12_scaffold_121_24
unknown

Not on your lists

comp(23892..24044)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_12_scaffold_121_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24330..25130
DNA (801bp) protein (267aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INX9_NATPD
hypothetical protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CAI50173.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
sw_12_scaffold_121_26
unknown

Not on your lists

25189..25305
DNA (117bp) protein (39aa)

This feature has no annotations

sw_12_scaffold_121_27
Segniliparus rotundus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25324..25896
DNA (573bp) protein (191aa)
X-Pro dipeptidyl-peptidase domain protein n=1 Tax=Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) RepID=D6ZET4_SEGRD
X-Pro dipeptidyl-peptidase domain protein {ECO:0000313|EMBL:ADG97458.1}; TaxID=640132 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rotund
Xaa-Pro dipeptidyl-peptidase
sw_12_scaffold_121_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26005..26670
DNA (666bp) protein (222aa)
Uracil-DNA glycosylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYA3_9EURY
Uracil-DNA glycosylase {ECO:0000313|EMBL:ELZ28200.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
uracil-DNA glycosylase
sw_12_scaffold_121_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26700..27740)
DNA (1041bp) protein (347aa)
Glycosyl transferase family 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ65_9EURY
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFW93129.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
family 2 glycosyl transferase
Displaying items 1-30 of 53 in total

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