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sw_12_scaffold_133

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_133_1
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..236)
DNA (234bp) protein (78aa)
doc; death on curing protein; K07341 death on curing protein id=24619525 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Death-on-curing family protein {ECO:0000313|EMBL:ERH06941.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
death on curing protein
sw_12_scaffold_133_2
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(249..929)
DNA (681bp) protein (227aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E4H3_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:ELY44853.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubr
enoyl-CoA hydratase II 4
sw_12_scaffold_133_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1040..1852
DNA (813bp) protein (271aa)
Thioredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ27_9EURY
Thioredoxin {ECO:0000313|EMBL:EMA44440.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
DsbA-like thioredoxin domain-containing protein
sw_12_scaffold_133_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1924..2469
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44441.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_133_5
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2569..2895
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W1A6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY43061.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_12_scaffold_133_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3005..3412
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7M6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41383.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_133_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3456..4769
DNA (1314bp) protein (438aa)
LOR/SDH bifunctional protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NA55_9EURY
LOR/SDH bifunctional protein {ECO:0000313|EMBL:EMA53505.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
hypothetical protein
sw_12_scaffold_133_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5215..6807)
DNA (1593bp) protein (531aa)
Sodium-solute symporter putative n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFH2_HALVA
Sodium-solute symporter putative {ECO:0000313|EMBL:EMA06754.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismo
putP-2; sodium-solute symporter
sw_12_scaffold_133_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6941..7666)
DNA (726bp) protein (242aa)
Putative transcription activator n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NU74_HALBP
putative transcription activator
Putative transcription activator {ECO:0000313|EMBL:ADQ68594.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bo
sw_12_scaffold_133_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7663..8325)
DNA (663bp) protein (221aa)
Transcriptional activator, TenA family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F034_9EURY
Transcriptional activator, TenA family protein {ECO:0000313|EMBL:ELZ53325.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
tenA2; thiamine biosynthesis/salvage protein TenA
sw_12_scaffold_133_11
unknown

Not on your lists

8497..8790
DNA (294bp) protein (98aa)

This feature has no annotations

sw_12_scaffold_133_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8851..10170)
DNA (1320bp) protein (440aa)
ABC transporter n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIX2_HALMO
ABC transporter {ECO:0000313|EMBL:EMA45647.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
btuD; ABC-type transport system ATP-binding protein (probable substrate cobalamin)
sw_12_scaffold_133_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10167..11270)
DNA (1104bp) protein (368aa)
ABC-type vitamin B12 transporter, permease component BtuC n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFG2_9EURY
btuC; ABC-type vitamin B12 transporter, permease component BtuC
ABC-type vitamin B12 transporter, permease component BtuC {ECO:0000313|EMBL:CCQ34377.1}; Cobalamin import system permease protein BtuC {ECO:0000313|EMBL:ERJ06063.1}; TaxID=1033806 species="Archaea; Eu
sw_12_scaffold_133_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11333..12664
DNA (1332bp) protein (444aa)
Periplasmic binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ26_9EURY
Periplasmic binding protein {ECO:0000313|EMBL:EMA38822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
periplasmic binding protein
sw_12_scaffold_133_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12808..13086
DNA (279bp) protein (93aa)
Signal recognition particle 19 kDa protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSZ1_9EURY
Signal recognition particle 19 kDa protein {ECO:0000256|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000256|HAMAP-Rule:MF_00305};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
signal recognition particle 19 kDa protein
sw_12_scaffold_133_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13175..13396
DNA (222bp) protein (74aa)
H/ACA RNA-protein complex component Gar1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N459_9EURY
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:EMA52651.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1
sw_12_scaffold_133_17
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13477..14715
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XKE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY62205.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
sw_12_scaffold_133_18
unknown

Not on your lists

14747..15013
DNA (267bp) protein (89aa)

This feature has no annotations

sw_12_scaffold_133_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15148..15981)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41459.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_133_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16184..17254)
DNA (1071bp) protein (357aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRU4_9EURY
Ornithine cyclodeaminase {ECO:0000313|EMBL:EFW92713.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
sw_12_scaffold_133_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17473..19317
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44937.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_133_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19763..20740
DNA (978bp) protein (326aa)
Transcription initiation factor IIB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1P5_HALMD
transcription factor TFIIB cyclin-related protein
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_12_scaffold_133_23
unknown

Not on your lists

comp(20588..20899)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_12_scaffold_133_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20960..21643
DNA (684bp) protein (228aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MFR6_HALMO
3-dehydroquinate dehydratase
sw_12_scaffold_133_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21980..23173)
DNA (1194bp) protein (398aa)
Threonine synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJJ1_9EURY
Threonine synthase {ECO:0000313|EMBL:EMA45508.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5
threonine synthase
sw_12_scaffold_133_26
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23319..24701
DNA (1383bp) protein (461aa)
Amine oxidase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CS58_9EURY
Amine oxidase {ECO:0000313|EMBL:ELZ25247.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
amine oxidase
sw_12_scaffold_133_27
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24772..25491)
DNA (720bp) protein (240aa)
phosphoesterase, icc; K06953 id=24614228 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Phosphoesterase, icc {ECO:0000313|EMBL:ESP89311.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
putative phosphoesterase, ICC
sw_12_scaffold_133_28
unknown

Not on your lists

comp(25613..25774)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 28 items

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