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sw_12_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_142_1
unknown

Not on your lists

comp(222..413)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_12_scaffold_142_2
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

458..2050
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IFM9_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY47682.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
sw_12_scaffold_142_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2136..3284
DNA (1149bp) protein (383aa)
Deacylase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPG4_HALBP
deacylase
Deacylase {ECO:0000313|EMBL:ELY30994.1}; Predicted deacylase {ECO:0000313|EMBL:ADQ66519.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;
sw_12_scaffold_142_4
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3336..4268)
DNA (933bp) protein (311aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JIZ8_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EMA07949.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax
binding-protein-dependent transport systems inner membrane component
sw_12_scaffold_142_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4282..5241)
DNA (960bp) protein (320aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halogranum salarium B-1 RepID=J3ETY6_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EJN57697.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source
binding-protein-dependent transport systems inner membrane component
sw_12_scaffold_142_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5257..6645)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57696.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
extracellular solute-binding protein family 1
sw_12_scaffold_142_7
unknown

Not on your lists

comp(6609..6884)
DNA (276bp) protein (92aa)

This feature has no annotations

sw_12_scaffold_142_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7017..8219
DNA (1203bp) protein (401aa)
ABC transporter related protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDQ5_9EURY
ABC transporter related protein {ECO:0000313|EMBL:EJN57694.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
sw_12_scaffold_142_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8315..9817)
DNA (1503bp) protein (501aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=113250
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZP0_9EURY
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
sw_12_scaffold_142_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9817..10149)
DNA (333bp) protein (111aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK43_9EURY
glutamyl-tRNA(Gln) amidotransferase subunit C
sw_12_scaffold_142_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10288..10770
DNA (483bp) protein (161aa)
NUDIX hydrolase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNY0_HALUD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACV10271.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM 1
sw_12_scaffold_142_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10891..11436
DNA (546bp) protein (182aa)
Molecular chaperone DnaJ n=3 Tax=Halococcus hamelinensis RepID=M0M6T9_9EURY
Molecular chaperone DnaJ {ECO:0000313|EMBL:EMA41507.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
heat shock protein DnaJ domain-containing protein
sw_12_scaffold_142_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11690..12394
DNA (705bp) protein (235aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
Phosphoglycolate phosphatase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M832_9EURY
SPP-like hydrolase
sw_12_scaffold_142_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12473..13168)
DNA (696bp) protein (232aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=797114 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halomicrobium katesii RepID=UPI000367D1CA
3,4-dihydroxy-2-butanone 4-phosphate synthase
sw_12_scaffold_142_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13170..13928)
DNA (759bp) protein (253aa)
Riboflavin kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W857_9EURY
riboflavin kinase
Riboflavin kinase {ECO:0000313|EMBL:AGN01508.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_12_scaffold_142_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14171..14881
DNA (711bp) protein (237aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9M5_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA42451.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
acyl dehydratase
sw_12_scaffold_142_17
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15019..15276
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7G3_9EURY
Transcriptional regulator, AbrB family protein {ECO:0000313|EMBL:ELZ43761.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transcriptional regulator, AbrB family
sw_12_scaffold_142_18
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15287..15694
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I8J5_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB15133.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
sw_12_scaffold_142_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15775..16233
DNA (459bp) protein (153aa)
Thioesterase superfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q6_9EURY
Thioesterase superfamily protein {ECO:0000313|EMBL:EMA52491.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
thioesterase superfamily protein
sw_12_scaffold_142_20
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16360..17715
DNA (1356bp) protein (452aa)
TraB family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4R9_HALJB
TraB family protein
TraB family protein {ECO:0000313|EMBL:ADJ15536.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
sw_12_scaffold_142_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17783..18406
DNA (624bp) protein (208aa)
metalloprotease (EC:3.4.24.-)
Peptidase M50 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH55_9EURY
Peptidase M50 {ECO:0000313|EMBL:EMA44688.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
sw_12_scaffold_142_22
unknown

Not on your lists

18646..18834
DNA (189bp) protein (63aa)

This feature has no annotations

sw_12_scaffold_142_23
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18831..19973
DNA (1143bp) protein (381aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLN7_HALBP
sw_12_scaffold_142_24
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20110..20607)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3T4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13425.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_142_25
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20723..21178
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NRU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA69516.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_12_scaffold_142_26
unknown

Not on your lists

comp(21995..22132)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_12_scaffold_142_27
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22304..22858)
DNA (555bp) protein (185aa)
Type 11 methyltransferase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X876_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELY57949.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus D
methylase involved in ubiquinone/menaquinone biosynthesis
sw_12_scaffold_142_28

Not on your lists

comp(22926..24155)
DNA (1230bp) protein (410aa)
Arabinose efflux permease n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPY2_9ARCH
Arabinose efflux permease {ECO:0000313|EMBL:ESS10564.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sugar transporter
sw_12_scaffold_142_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24781..26382
DNA (1602bp) protein (534aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQ74_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EFW93138.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source
type I phosphodiesterase/nucleotide pyrophosphatase
sw_12_scaffold_142_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26379..27404
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKA1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23715.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
putative methicillin resistance protein
Displaying items 1-30 of 47 in total

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