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sw_12_scaffold_146

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_146_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..143
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:ADB59313.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_12_scaffold_146_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

140..421
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZI2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50259.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_12_scaffold_146_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

779..1873
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MC22_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42209.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_12_scaffold_146_4
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2000..2329)
DNA (330bp) protein (110aa)
Ferredoxin n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YM74_9EURY
Ferredoxin {ECO:0000313|EMBL:ELY74776.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
ferredoxin
sw_12_scaffold_146_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2455..3660)
DNA (1206bp) protein (402aa)
Transporter n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYI0_9EURY
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
nac; sodium-and chloride-dependent transporter
sw_12_scaffold_146_6
unknown

Not on your lists

3674..3835
DNA (162bp) protein (54aa)

This feature has no annotations

sw_12_scaffold_146_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4015..5379
DNA (1365bp) protein (455aa)
2,3-di-O-geranylgeranylglyceryl phosphate reductase (EC:1.3.99.-)
P-hydroxybenzoate hydroxylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR40_9EURY
P-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:ELZ25691.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
sw_12_scaffold_146_8
unknown

Not on your lists

5618..5956
DNA (339bp) protein (113aa)

This feature has no annotations

sw_12_scaffold_146_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6253..7302)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHH5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60986.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative drug/metabolite exporter family protein permease
sw_12_scaffold_146_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7485..8042)
DNA (558bp) protein (186aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4C2_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EMA51510.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
putative pyridine nucleotide-disulfide oxidoreductase
sw_12_scaffold_146_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8171..8677)
DNA (507bp) protein (169aa)
Cyclase/dehydrase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3V1_9EURY
Cyclase/dehydrase {ECO:0000313|EMBL:EMA52223.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
hypothetical protein
sw_12_scaffold_146_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8878..10467
DNA (1590bp) protein (530aa)
Phosphoesterase RecJ domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWV6_9EURY
Phosphoesterase RecJ domain-containing protein {ECO:0000313|EMBL:EMA49319.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
phosphoesterase RecJ domain-containing protein
sw_12_scaffold_146_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10682..11482
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44188.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
putative signal transduction protein with CBS domains
sw_12_scaffold_146_14
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11788..11916
DNA (129bp) protein (43aa)
HoxA-like transcriptional regulator {ECO:0000313|EMBL:ELZ91303.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATC
sw_12_scaffold_146_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11925..12179
DNA (255bp) protein (85aa)
Response regulator receiver protein {ECO:0000313|EMBL:ERH11051.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
response regulator receiver protein id=24649974 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
response regulator receiver protein
sw_12_scaffold_146_16
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12270..13973
DNA (1704bp) protein (568aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NIP2_9EURY
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:EMA56959.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocu
sw_12_scaffold_146_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14194..16182
DNA (1989bp) protein (663aa)
Putative acetyl-coenzyme A synthetase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWP4_9EURY
Putative acetyl-coenzyme A synthetase {ECO:0000313|EMBL:EFW91140.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
acetate/CoA ligase
sw_12_scaffold_146_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16497..16808
DNA (312bp) protein (104aa)
GPR1/FUN34/yaaH family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NIM0_9EURY
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:EMA56495.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
hypothetical protein
sw_12_scaffold_146_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17367..18740
DNA (1374bp) protein (458aa)
Putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU95_9EURY
Putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:EMA49312.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
livJ1; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
sw_12_scaffold_146_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18945..19946
DNA (1002bp) protein (334aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUK5_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA49311.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livH1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_12_scaffold_146_21
unknown

Not on your lists

20030..20092
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 21 items

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