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sw_12_scaffold_177

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_177_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34..1629)
DNA (1596bp) protein (532aa)
crtI_1; phytoene dehydrogenase 1 (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase 1 (Phytoene desaturase) n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4C9_9EURY
Phytoene dehydrogenase 1 (Phytoene desaturase) {ECO:0000313|EMBL:EMA52010.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
sw_12_scaffold_177_2
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1895..3409
DNA (1515bp) protein (505aa)
MATE efflux family protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3C0_9EURY
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ADB60821.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (st
sw_12_scaffold_177_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3559..5061
DNA (1503bp) protein (501aa)
lignostilbene-alpha,beta-dioxygenase (EC:1.13.11.-)
Lignostilbene-alpha,beta-dioxygenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5K7_9EURY
Lignostilbene-alpha,beta-dioxygenase {ECO:0000313|EMBL:EMA51965.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
sw_12_scaffold_177_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5245..5580
DNA (336bp) protein (112aa)
Nucleotide pyrophosphohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVH6_9EURY
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:EMA49338.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
putative pyrophosphatase
sw_12_scaffold_177_5

Not on your lists

comp(5672..6355)
DNA (684bp) protein (228aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XVF9_9ARCH
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:ESS06168.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
thiamine pyrophosphate protein domain protein TPP-binding protein
sw_12_scaffold_177_6

Not on your lists

comp(6345..6854)
DNA (510bp) protein (170aa)
putative decarboxylase (EC:4.1.1.-)
Putative thiamine-pyrophosphate-binding protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDX3_9ARCH
Putative thiamine-pyrophosphate-binding protein {ECO:0000313|EMBL:ESS06169.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_177_7
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6942..8384)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLM5_9EURY
amidase
Amidase {ECO:0000313|EMBL:ADD07407.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 / DSM 3394 / N
sw_12_scaffold_177_8

Not on your lists

comp(8546..9079)
DNA (534bp) protein (178aa)
UspA domain-containing protein n=1 Tax=halophilic archaeon DL31 RepID=G2MG46_9ARCH
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEN05940.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_177_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9212..9712
DNA (501bp) protein (167aa)
UspA domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWF2_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:EMA50047.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
UspA domain-containing protein
sw_12_scaffold_177_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10418..11893
DNA (1476bp) protein (492aa)
mmsA; methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] id=24615488 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ESP87032.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
mmsA; methylmalonate-semialdehyde dehydrogenase
sw_12_scaffold_177_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12087..13496
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP00_9EURY
livH; ABC-type branched-chain amino acid transport system, permease I
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAJ52915.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
sw_12_scaffold_177_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13504..15312
DNA (1809bp) protein (603aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LJM9_HALWC
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCC40963.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
sw_12_scaffold_177_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15309..16280
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SW79_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG92734.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
sw_12_scaffold_177_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16654..18147
DNA (1494bp) protein (498aa)
livJ; ABC-type branched-chain amino acid transport systems, substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein id=24631242 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ERG95021.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
livJ3; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
sw_12_scaffold_177_15
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18331..19041
DNA (711bp) protein (237aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JRZ3_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA10430.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_12_scaffold_177_16
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19429..20406
DNA (978bp) protein (326aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9V4_HALRX
glycine/D-amino acid oxidase, deaminating
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:AGB15021.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (
sw_12_scaffold_177_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20513..21136)
DNA (624bp) protein (208aa)
GCN5-related N-acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IB93_9EURY
Protein N-acetyltransferase {ECO:0000313|EMBL:AHG02657.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1
N-acetyltransferase GCN5
sw_12_scaffold_177_18
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21133..21489)
DNA (357bp) protein (119aa)
UspA domain-containing protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I4Z8_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:ELZ90459.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis AT
uspA14; UspA domain-containing protein
sw_12_scaffold_177_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21523..22377
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD19_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43248.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_177_20
unknown

Not on your lists

22496..22648
DNA (153bp) protein (51aa)

This feature has no annotations

sw_12_scaffold_177_21
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22641..24464
DNA (1824bp) protein (608aa)
Beta-lactamase n=4 Tax=Bacillus thuringiensis RepID=C3DBE0_BACTU
Beta-lactamase
Penicillin-binding protein E {ECO:0000313|EMBL:ERH96750.1}; TaxID=1324966 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringie
sw_12_scaffold_177_22
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25397..25933
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L4F3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA28457.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
sw_12_scaffold_177_23
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26099..26584)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PN66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA70250.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_12_scaffold_177_24
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26699..27049)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NW72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61489.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_12_scaffold_177_25
unknown

Not on your lists

27668..28069
DNA (402bp) protein (134aa)

This feature has no annotations

sw_12_scaffold_177_26
unknown

Not on your lists

comp(28249..28371)
DNA (123bp) protein (41aa)

This feature has no annotations

sw_12_scaffold_177_27
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28955..31447
DNA (2493bp) protein (831aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H3J6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ79081.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_12_scaffold_177_28
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31782..32270
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKG20416.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
sw_12_scaffold_177_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32249..32386
DNA (138bp) protein (46aa)
Transposase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMT6_9EURY
Transposase {ECO:0000313|EMBL:EMA46034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
Displaying 29 items

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