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sw_12_scaffold_180

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_180_1

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comp(128..1651)
DNA (1524bp) protein (508aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
NAD-dependent aldehyde dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y7F7_9ARCH
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:ESS06992.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_180_2

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comp(1721..2818)
DNA (1098bp) protein (366aa)
Threonine dehydrogenase related Zn-dependent dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y233_9ARCH
Threonine dehydrogenase related Zn-dependent dehydrogenase {ECO:0000313|EMBL:ESS06651.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
threonine dehydrogenase
sw_12_scaffold_180_3
unknown

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3013..3126
DNA (114bp) protein (38aa)

This feature has no annotations

sw_12_scaffold_180_4
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3119..4420
DNA (1302bp) protein (434aa)
Metal-dependent cyclase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ALX0_NATA1
Metal-dependent cyclase {ECO:0000313|EMBL:ELY98912.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
metal-dependent cyclase
sw_12_scaffold_180_5
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4618..5379)
DNA (762bp) protein (254aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X2P3_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ELY56004.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylo
enoyl-CoA hydratase/isomerase
sw_12_scaffold_180_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5525..5890)
DNA (366bp) protein (122aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUX7_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA36179.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
hypothetical protein
sw_12_scaffold_180_7
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5859..6542)
DNA (684bp) protein (228aa)
acs_5; acyl-CoA synthetase I 5 (EC:6.2.1.-)
AMP-dependent synthetase and ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WY31_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY54076.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
sw_12_scaffold_180_8
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7193..7516)
DNA (324bp) protein (108aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WPX4_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY50398.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
sw_12_scaffold_180_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7912..10773)
DNA (2862bp) protein (954aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS2; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MHW0_HALMO
sw_12_scaffold_180_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11103..12620
DNA (1518bp) protein (506aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92999.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_180_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12801..14492
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW62_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91196.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_180_12
unknown

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comp(14532..14705)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_12_scaffold_180_13
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14738..15712)
DNA (975bp) protein (325aa)
replication factor c small subunit; K04801 replication factor C small subunit id=24621262 bin=Halonotius_J07HN6 species=unknown genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=12
DNA polymerase III, gamma/tau subunit
sw_12_scaffold_180_14
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15844..16041
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JC11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA05908.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
hypothetical protein
sw_12_scaffold_180_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16049..16492
DNA (444bp) protein (148aa)
N-acetyltransferase GCN5 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5N0_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EMA52863.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
putative acetyltransferase
sw_12_scaffold_180_16
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16524..17906)
DNA (1383bp) protein (461aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XR87_9EURY
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ELY64329.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
sw_12_scaffold_180_17

Not on your lists

comp(18438..18983)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZXF8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07690.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
carboxymuconolactone decarboxylase
sw_12_scaffold_180_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19182..21398
DNA (2217bp) protein (739aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFP8_9EURY
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EMA56671.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
dipeptidyl aminopeptidase/acylaminoacyl peptidase
sw_12_scaffold_180_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21321..21626)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NF86_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56218.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
putative plasmid stabilization protein
sw_12_scaffold_180_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21619..21966)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MU69_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48873.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
Displaying 20 items

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