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sw_12_scaffold_183

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_183_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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205..363
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8H1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16217.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_183_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

360..785
DNA (426bp) protein (142aa)
Molecular chaperone n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRG5_HALBP
molecular chaperone
Molecular chaperone {ECO:0000313|EMBL:ELY24073.1}; Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:ADQ68006.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacal
sw_12_scaffold_183_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(963..2573)
DNA (1611bp) protein (537aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKV6_NATP1
hypothetical protein
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ELY81852.1}; Uncharacterized protein {ECO:0000313|EMBL:AGB31212.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Na
sw_12_scaffold_183_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2667..3668)
DNA (1002bp) protein (334aa)
Glycosyltransferase-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ60_9EURY
Glycosyltransferase-like protein {ECO:0000313|EMBL:EFW93124.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauc
group 1 glycosyl transferase
sw_12_scaffold_183_5
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3875..4807
DNA (933bp) protein (311aa)
Polysaccharide deacetylase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W7N7_9EURY
Polysaccharide deacetylase {ECO:0000313|EMBL:ELY45352.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM
polysaccharide deacetylase
sw_12_scaffold_183_6
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4856..6022
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZM4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ15124.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_12_scaffold_183_7
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6154..7347
DNA (1194bp) protein (398aa)
ATP-grasp protein-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBE3_9EURY
ATP-grasp protein-like protein {ECO:0000313|EMBL:ELY58962.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inn
ATP-grasp protein-like protein
sw_12_scaffold_183_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7372..8931)
DNA (1560bp) protein (520aa)
Polysaccharide biosynthesis protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI10_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EMA45362.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
membrane protein involved in the export of O-antigen and teichoic acid
sw_12_scaffold_183_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9309..10037)
DNA (729bp) protein (243aa)
HD family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISH7_NATPD
hypothetical protein
HD family hydrolase {ECO:0000313|EMBL:CAI48909.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_12_scaffold_183_10
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10140..10925
DNA (786bp) protein (262aa)
Alanyl-tRNA synthetase, class IIc-like protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W094_9EURY
Alanyl-tRNA synthetase, class IIc-like protein
Alanyl-tRNA synthetase, class IIc-like protein {ECO:0000313|EMBL:AGN01906.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinar
sw_12_scaffold_183_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11129..11893
DNA (765bp) protein (255aa)
N-acetyltransferase GCN5 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LW34_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EMA37676.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
N-acetyltransferase GCN5
sw_12_scaffold_183_12
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12059..12736
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CE17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20893.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_12_scaffold_183_13
unknown

Not on your lists

comp(12700..13071)
DNA (372bp) protein (124aa)

This feature has no annotations

sw_12_scaffold_183_trna_2
unknown

Not on your lists

comp(13187..13258)
DNA (72bp)
transferRNA
sw_12_scaffold_183_14
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13390..14181)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H698_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ79287.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
sw_12_scaffold_183_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14404..14907)
DNA (504bp) protein (168aa)
IS1341-type transposase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MRF0_9EURY
IS1341-type transposase {ECO:0000313|EMBL:EMA48201.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
IS1341-type transposase
sw_12_scaffold_183_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14941..15561)
DNA (621bp) protein (207aa)
IS1341-type transposase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MRF0_9EURY
IS1341-type transposase {ECO:0000313|EMBL:EMA48201.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
transposase, IS605 OrfB family, central region
sw_12_scaffold_183_17
unknown

Not on your lists

comp(15622..15711)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_12_scaffold_183_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16150..16800
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_183_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16829..17659)
DNA (831bp) protein (277aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1210908 species=
nh(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Halogranum salarium B-1 RepID=J2ZC41_9EURY
sw_12_scaffold_183_trna_1
unknown

Not on your lists

17783..17853
DNA (71bp)
transferRNA
sw_12_scaffold_183_20
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18065..19189
DNA (1125bp) protein (375aa)
Site-specific recombinase xerd n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CU34_9EURY
Site-specific recombinase xerd {ECO:0000313|EMBL:ELZ25912.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola
site-specific recombinase XerD
sw_12_scaffold_183_21
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19507..20985)
DNA (1479bp) protein (493aa)
Phage integrase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H8U5_9EURY
Phage integrase {ECO:0000313|EMBL:ELZ80157.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
XerC/D-like integrase
Displaying 23 items

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