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sw_12_scaffold_1910

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1910_1
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..199
DNA (198bp) protein (66aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAA7_9EURY
amidophosphoribosyltransferase
sw_12_scaffold_1910_2
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(396..1064)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AI78_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY97078.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_12_scaffold_1910_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1169..2323
DNA (1155bp) protein (385aa)
Class I and II aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E1_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA53473.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
class I and II aminotransferase
sw_12_scaffold_1910_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2513..2890
DNA (378bp) protein (126aa)
Translation initiation factor 5A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LU04_9EURY
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
translation initiation factor IF-5A
sw_12_scaffold_1910_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2986..3819
DNA (834bp) protein (278aa)
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0M5_9EURY
Agmatinase {ECO:0000313|EMBL:EMA50230.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
sw_12_scaffold_1910_6
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3816..4871
DNA (1056bp) protein (352aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=797303 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFY5_NATP1
dinuclear metal center protein, YbgI/SA1388 family
sw_12_scaffold_1910_7
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5266..5778
DNA (513bp) protein (171aa)
Bacteriorhodopsin n=1 Tax=Halonotius sp. J07HN4 RepID=U1P7Y5_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ERH06401.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
rhodopsin
sw_12_scaffold_1910_8
unknown

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5800..6084
DNA (285bp) protein (95aa)

This feature has no annotations

sw_12_scaffold_1910_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6210..7274
DNA (1065bp) protein (355aa)
Deoxyhypusine synthase {ECO:0000313|EMBL:ELZ24850.1}; EC=2.5.1.46 {ECO:0000313|EMBL:ELZ24850.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosim
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNK6_9EURY
sw_12_scaffold_1910_10

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comp(7356..8318)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SW89_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07226.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_1910_11
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8600..8905)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH13573.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
Displaying 11 items

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