ggKbase home page

sw_12_scaffold_194

Search features with annotation key words

Displaying items 1-30 of 53 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_194_1
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..260)
DNA (258bp) protein (86aa)
PGF-CTERM archaeal protein-sorting signal (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1PCS0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY44837.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
sw_12_scaffold_194_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

449..1135
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55439.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_194_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1250..1504
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LW44_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37686.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_194_4
unknown

Not on your lists

1800..2156
DNA (357bp) protein (119aa)

This feature has no annotations

sw_12_scaffold_194_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2240..3787)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8V4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00964.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_12_scaffold_194_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4085..4648
DNA (564bp) protein (188aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=113
GMP synthase subunit A (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] subunit A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M159_9EURY
sw_12_scaffold_194_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4799..6841
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLZ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46712.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
conserved hypothetical membrane protein (DUF2070)
sw_12_scaffold_194_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7090..7563
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PI84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09814.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
type II secretion system protein E
sw_12_scaffold_194_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7667..8092
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKB4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44885.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_194_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8094..8978
DNA (885bp) protein (295aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTE4_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA36706.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
NAD-dependent epimerase/dehydratase
sw_12_scaffold_194_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9133..9561)
DNA (429bp) protein (143aa)
AsnC family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2Q2_HALJB
transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELY34975.1}; Transcription regulator {ECO:0000313|EMBL:ADJ15009.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
sw_12_scaffold_194_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9796..10734)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JI44_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61531.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
sw_12_scaffold_194_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10755..12665)
DNA (1911bp) protein (637aa)
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoacid:ferredoxin oxidoreductase subunit alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQP2_9EURY
2-oxoacid:ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:EMA35806.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
sw_12_scaffold_194_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12907..13698)
DNA (792bp) protein (264aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CUL4_9EURY
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:ELZ26092.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
metallo-beta-lactamase superfamily protein
sw_12_scaffold_194_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13856..15142
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2N7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52121.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_194_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15247..16491)
DNA (1245bp) protein (415aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N842_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA53289.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
acyl-CoA dehydrogenase
sw_12_scaffold_194_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16594..16980
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NGB8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55745.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_12_scaffold_194_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17196..17552
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT34_NATPD
smc operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48700.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_12_scaffold_194_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17648..21163
DNA (3516bp) protein (1172aa)
Chromosome partition protein Smc n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N2A0_HALMO
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morr
smc; chromosome partition protein
sw_12_scaffold_194_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21156..22151
DNA (996bp) protein (332aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N3F3_HALMO
Chromosome segregation and condensation protein ScpA {ECO:0000313|EMBL:EMA51644.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
hypothetical protein
sw_12_scaffold_194_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22198..23115)
DNA (918bp) protein (306aa)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; TaxID=931277 species="Archaea; Euryarcha
methylthioadenosine phosphorylase (EC:2.4.2.28)
Purine nucleoside phosphorylase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N0Z8_HALMO
sw_12_scaffold_194_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23321..24700
DNA (1380bp) protein (460aa)
Major facilitator superfamily protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N515_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA51795.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus th
hypothetical protein
sw_12_scaffold_194_23
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24923..25627)
DNA (705bp) protein (235aa)
Phosphoribosyltransferase-like protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GT96_9EURY
Phosphoribosyltransferase-like protein {ECO:0000313|EMBL:ELZ74762.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larseni
putative phosphoribosyltransferase
sw_12_scaffold_194_24
unknown

Not on your lists

comp(25830..25985)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_12_scaffold_194_25
unknown

Not on your lists

comp(26057..26743)
DNA (687bp) protein (229aa)

This feature has no annotations

sw_12_scaffold_194_26
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26998..28482
DNA (1485bp) protein (495aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:AGB36469.1}; EC=2.7.9.2 {ECO:0000313|EMBL:AGB36469.1};; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronoc
Phosphoenolpyruvate synthase n=1 Tax=Natronococcus occultus SP4 RepID=L0JWI9_9EURY
sw_12_scaffold_194_27
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28558..29124
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N103_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA51652.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_12_scaffold_194_28
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


29437..31671
DNA (2235bp) protein (745aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=931277 species="Archaea; E
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N2A8_HALMO
sw_12_scaffold_194_29
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32086..32361)
DNA (276bp) protein (92aa)
Aminoglycoside phosphotransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MTB9_9EURY
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EMA48876.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thaila
sw_12_scaffold_194_30
unknown

Not on your lists

comp(32358..32453)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

View Taxonomy