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sw_12_scaffold_202

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_202_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(315..707)
DNA (393bp) protein (131aa)
Transposase IS4 family protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MYD3_HALMO
Transposase IS4 family protein {ECO:0000313|EMBL:EMA50601.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae D
sw_12_scaffold_202_2

Not on your lists

comp(1059..2027)
DNA (969bp) protein (323aa)
Arabinose efflux permease n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPY2_9ARCH
Arabinose efflux permease {ECO:0000313|EMBL:ESS10564.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sugar transporter
sw_12_scaffold_202_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2243..2971)
DNA (729bp) protein (243aa)
2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GQY8_9EURY
2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase {ECO:0000313|EMBL:ESP87466.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" so
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
sw_12_scaffold_202_4
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3121..4215)
DNA (1095bp) protein (365aa)
Oxidoreductase domain protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0II03_9EURY
Oxidoreductase domain protein {ECO:0000313|EMBL:ELZ96400.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATC
oxidoreductase domain protein
sw_12_scaffold_202_5
unknown

Not on your lists

comp(4291..4524)
DNA (234bp) protein (78aa)

This feature has no annotations

sw_12_scaffold_202_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4611..5744)
DNA (1134bp) protein (378aa)
Altronate dehydratase-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXJ6_9EURY
Altronate dehydratase-like protein {ECO:0000313|EMBL:ELZ27946.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
Altronate dehydratase-like protein
sw_12_scaffold_202_7
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5741..6064)
DNA (324bp) protein (108aa)
Altronate hydrolase n=2 Tax=Halarchaeum acidiphilum RepID=U2YFL7_9EURY
Altronate hydrolase {ECO:0000313|EMBL:GAD52846.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
garD; dehydratase
sw_12_scaffold_202_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6097..7302)
DNA (1206bp) protein (402aa)
Altronate dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUN8_9EURY
Altronate dehydratase {ECO:0000313|EMBL:EMA48175.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
hypothetical protein
sw_12_scaffold_202_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7739..8509
DNA (771bp) protein (257aa)
IclR family transcriptional regulator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZH5_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ15482.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sa
IclR family transcriptional regulator
sw_12_scaffold_202_10
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8817..10517
DNA (1701bp) protein (567aa)
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XN57_9EURY
Thiamine pyrophosphate protein domain protein TPP-binding protein {ECO:0000313|EMBL:ELY63175.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;"
thiamine pyrophosphate protein domain protein TPP-binding protein
sw_12_scaffold_202_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10587..11513)
DNA (927bp) protein (309aa)
Dihydrodipicolinate synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8U6_9EURY
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EMA54311.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
dihydrodipicolinate synthetase
sw_12_scaffold_202_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11700..12521
DNA (822bp) protein (274aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halogranum salarium B-1 RepID=J3JHA2_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EJN60814.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NAD-dependent epimerase/dehydratase
sw_12_scaffold_202_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12806..13414
DNA (609bp) protein (203aa)
hpcH; HpcH/HpaI aldolase family protein (EC:4.1.3.-)
HpcH/HpaI aldolase n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG9_9EURY
Aldolase {ECO:0000313|EMBL:AHG02996.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_12_scaffold_202_14
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13478..14854
DNA (1377bp) protein (459aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI000312A213
ABC transporter substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CDY75667.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathe
sw_12_scaffold_202_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14851..15180
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AY74_AZOBR
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AIB15374.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
sw_12_scaffold_202_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15177..16910)
DNA (1734bp) protein (578aa)
Transporter, major facilitator family subfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB30_9EURY
Transporter, major facilitator family subfamily protein {ECO:0000313|EMBL:EMA54309.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
transporter, major facilitator family subfamily
sw_12_scaffold_202_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16964..18043
DNA (1080bp) protein (360aa)
Amidohydrolase 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFE5_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EMA56546.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552
amidohydrolase 2
sw_12_scaffold_202_18
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18204..18326
DNA (123bp) protein (41aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP02_9EURY
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:ELY63287.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natr
sw_12_scaffold_202_19
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18379..19845)
DNA (1467bp) protein (489aa)
glutamyl-tRNA amidotransferase subunit A id=24625673 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ERG97781.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
glutamyl-tRNA amidotransferase subunit A
sw_12_scaffold_202_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19900..20583)
DNA (684bp) protein (228aa)
Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY66_9EURY
Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:ELZ27548.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
mandelate racemase/muconate lactonizing protein
sw_12_scaffold_202_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20994..21593)
DNA (600bp) protein (200aa)
Gluconolactonase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NP37_9EURY
gnl; gluconolactonase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
gnl; gluconolactonase
Displaying 21 items

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