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sw_12_scaffold_209

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_209_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..230)
DNA (228bp) protein (76aa)
carbon monoxide dehydrogenase (EC:1.2.99.2)
Aerobic carbon monoxide dehydrogenase n=1 Tax=Halogranum salarium B-1 RepID=J3EWT6_9EURY
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:EMA53244.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
sw_12_scaffold_209_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

761..2206
DNA (1446bp) protein (482aa)
UraA2 protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFQ0_9EURY
UraA2 protein {ECO:0000313|EMBL:EJN59416.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
uracil permease
sw_12_scaffold_209_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2452..3216)
DNA (765bp) protein (255aa)
Cyclase family protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LM17_9EURY
Cyclase family protein {ECO:0000313|EMBL:EMA34612.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
cyclase
sw_12_scaffold_209_4
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3484..3606
DNA (123bp) protein (41aa)
Putative secreted protein {ECO:0000313|EMBL:ADI09494.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (stra
sw_12_scaffold_209_5
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

3769..4125
DNA (357bp) protein (119aa)
NmrA family protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BBD9_MEISD
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADH62699.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanu
sw_12_scaffold_209_6
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4247..4888)
DNA (642bp) protein (214aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E4K2_9GAMM
Epimerase {ECO:0000313|EMBL:KIA64142.1}; TaxID=1141657 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
epimerase
sw_12_scaffold_209_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5004..5240)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N351_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52306.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_209_8
unknown

Not on your lists

5647..6096
DNA (450bp) protein (150aa)

This feature has no annotations

sw_12_scaffold_209_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6125..7300)
DNA (1176bp) protein (392aa)
Amidohydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRM1_9EURY
Amidohydrolase {ECO:0000313|EMBL:EFW92640.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.
amidohydrolase
sw_12_scaffold_209_10
unknown

Not on your lists

7355..7504
DNA (150bp) protein (50aa)

This feature has no annotations

sw_12_scaffold_209_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7530..8531
DNA (1002bp) protein (334aa)
Alpha beta-propellor repeat-containing integrin n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MNV4_HALMO
Alpha beta-propellor repeat-containing integrin {ECO:0000313|EMBL:EMA51833.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
hypothetical protein
sw_12_scaffold_209_trna_1
unknown

Not on your lists

comp(8752..8824)
DNA (73bp)
transferRNA
sw_12_scaffold_209_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9068..9775
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P252_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10745.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_12_scaffold_209_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9906..10634
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27619.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_209_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10970..12490
DNA (1521bp) protein (507aa)
Replication factor A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC1_9EURY
Replication factor A {ECO:0000313|EMBL:ELZ27618.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
OB-fold tRNA/helicase-type nucleic acid binding protein
sw_12_scaffold_209_15
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12719..13177
DNA (459bp) protein (153aa)
Transcription factor CBF/NF-Y/histone domain protein n=5 Tax=Halorubrum RepID=M0D944_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:ELZ45146.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
transcription factor CBF/NF-Y/histone domain protein
sw_12_scaffold_209_16
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13174..14313
DNA (1140bp) protein (380aa)
Histone deacetylase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GU11_9EURY
Histone deacetylase {ECO:0000313|EMBL:ELZ75002.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hda1; HdaI-type histone deacetylase
sw_12_scaffold_209_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14292..15659)
DNA (1368bp) protein (456aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
cca; tRNA nucleotidyltransferase (EC:2.7.7.25)
CCA-adding enzyme n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB7_9EURY
sw_12_scaffold_209_18
unknown

Not on your lists

comp(15766..16041)
DNA (276bp) protein (92aa)

This feature has no annotations

sw_12_scaffold_209_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16194..17534
DNA (1341bp) protein (447aa)
5'-nucleotidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DKX7_9EURY
5'-nucleotidase {ECO:0000313|EMBL:ELZ34814.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
5'-nucleotidase
sw_12_scaffold_209_20
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17678..18085
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0H418_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78508.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
universal stress protein UspA
sw_12_scaffold_209_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18154..19389)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49352.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mechanosensitive ion channel MscS
sw_12_scaffold_209_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19544..20470
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49351.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_209_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20544..21275)
DNA (732bp) protein (244aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMZ8_9EURY
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EMA46114.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_12_scaffold_209_24
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21422..22081)
DNA (660bp) protein (220aa)
Trk system potassium uptake protein TrkA n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3AE54_9EURY
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:GAD53053.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilu
kefC; potassium transport protein kefC
Displaying 25 items

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